ARginyl aa-tRNA syntheTase (rrt-1)

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Finding cDNAs

UGID:58542 UniGene Cel.17117 Caenorhabditis elegans (nematode) rrt-1

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ARginyl aa-tRNA syntheTase (rrt-1)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_001022551.1	aRginyl aa-tRNA syntheTase family member (rrt-1)	C. elegans	100.0	712
NP_956342.1	arginyl-tRNA synthetase	D. rerio	62.3	580
NP_002878.2	arginyl-tRNA synthetase	H. sapiens	58.8	621
NP_080212.1	arginyl-tRNA synthetase	M. musculus	58.5	625
NP_573081.1	Arginyl-tRNA synthetase	D. melanogaster	56.8	620
XP_001695651.1	hypothetical protein CHLREDRAFT_119290	C. reinhardtii	49.0	587
NP_194360.1	emb1027 (embryo defective 1027); ATP binding / aminoacyl-tRNA ligase/ arginine-tRNA ligase/ nucleotide binding	A. thaliana	49.0	585

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	cDNA Sources:	mixed; L1 larva; L4 larva; unknown developmental stage

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:

III

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

NM_001027381.2	Caenorhabditis elegans aRginyl aa-tRNA syntheTase family member (rrt-1) (rrt-1) mRNA, complete cds	PA
NM_001027380.4	Caenorhabditis elegans aRginyl aa-tRNA syntheTase family member (rrt-1) (rrt-1) mRNA, complete cds	PA
NM_001129222.1	Caenorhabditis elegans aRginyl aa-tRNA syntheTase family member (rrt-1) (rrt-1) mRNA, complete cds	P

EST sequences (10 of 69) [Show all sequences]

CB385673.1		mixed		P
CB404778.1		mixed		P
BJ751599.1	Clone yk1367e07	mixed	5' read	P
BJ753423.1	Clone yk1389h02	mixed	5' read	P
BJ755971.1	Clone yk1420e06	mixed	5' read	P
BJ756713.1	Clone yk1493c03	mixed	5' read	P
BJ760254.1	Clone yk1537b09	mixed	5' read	P
BJ760909.1	Clone yk1569a07	mixed	5' read	P
BJ762231.1	Clone yk1585b08	mixed	5' read	P
BJ763041.1	Clone yk1594g09	mixed	5' read	PA

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria