Histone DeAcetylase (hda-2)

NCBI

UniGene
Homepage
FAQs
Query Tips
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
dbEST
Trace Archive

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs

UGID:56337 UniGene Cel.14857 Caenorhabditis elegans (nematode) hda-2

Links

Histone DeAcetylase (hda-2)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_495678.1	Histone DeAcetylase family member (hda-2)	C. elegans	100.0	506
NP_957284.1	histone deacetylase 3	D. rerio	57.9	375
NP_034541.2	histone deacetylase 3	M. musculus	57.3	396
NP_003874.2	histone deacetylase 3	H. sapiens	57.1	396
XP_001695812.1	histone deacetylase	C. reinhardtii	56.3	380
NP_001078511.1	HD1 (HISTONE DEACETYLASE 1); basal transcription repressor/ histone deacetylase/ protein binding	A. thaliana	55.1	454
NP_651978.2	Hdac3	D. melanogaster	54.9	432
NP_001081491.1	yeast RPD3 homologue	X. laevis	54.3	403
XP_325004.1	hypothetical protein	N. crassa	53.6	414
NP_011321.1	Histone deacetylase required for gene activation via specific deacetylation of lysines in H3 and H4 histone tails; subunit of the Set3 complex, a meiotic-specific repressor of sporulation specific genes that contains deacetylase activity; Hos2p	S. cerevisiae	51.9	443

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources.
	cDNA Sources:	mixed; L4 larva; unknown developmental stage; embryo

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (1)

NM_063277.4

Caenorhabditis elegans Histone DeAcetylase family member (hda-2) (hda-2) mRNA, complete cds

EST sequences (10 of 16) [Show all sequences]

CB385629.1		mixed		P
CB404744.1		mixed		P
BJ751497.1	Clone yk1366d03	mixed	5' read	P
BJ768196.1	Clone yk1667e10	mixed	5' read	P
BJ775555.1	Clone yk1366d03	mixed	3' read	P
BJ792684.1	Clone yk1667e10	mixed	3' read	P
BJ799812.1	Clone yk1430f05	L4 larva	5' read	P
BJ802480.1	Clone yk1461e03	L4 larva	5' read	P
BJ809214.1	Clone yk1430f05	L4 larva	3' read	P
EC014172.1	Clone 1813703	unknown developmental stage		P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria