NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Query Tips
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
dbEST
Trace Archive

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs

UGID:54857     UniGene Cel.13354     Caenorhabditis elegans (nematode)   tag-335
Temporarily Assigned Gene name (tag-335)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_502333.2 Temporarily Assigned Gene name family member (tag-335) C. elegans 100.0 364
NP_649498.1 CG1129, isoform A D. melanogaster 69.0 357
NP_808578.1 GDP-mannose pyrophosphorylase B M. musculus 67.2 359
NP_068806.1 GDP-mannose pyrophosphorylase B isoform 2 H. sapiens 66.9 359
NP_001087522.1 MGC84017 protein X. laevis 66.7 359
NP_001003491.1 GDP-mannose pyrophosphorylase B D. rerio 66.4 359
NP_010228.1 GDP-mannose pyrophosphorylase (mannose-1-phosphate guanyltransferase), synthesizes GDP-mannose from GTP and mannose-1-phosphate in cell wall biosynthesis; required for normal cell wall structure; Psa1p S. cerevisiae 60.9 360
XP_325858.1 hypothetical protein ( (U89991) mannose-1-phosphate guanylyltransferase [Hypocrea jecorina] ) N. crassa 60.2 363
NP_181507.1 CYT1 (CYTOKINESIS DEFECTIVE 1); mannose-1-phosphate guanylyltransferase/ nucleotidyltransferase A. thaliana 60.1 360
XP_001695916.1 GDP-D-mannose pyrophosphorylase C. reinhardtii 58.9 359

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
cDNA Sources: mixed; unknown developmental stage
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: IV
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (1)

NM_069932.4 Caenorhabditis elegans Temporarily Assigned Gene name family member (tag-335) (tag-335) mRNA, complete cds PA

EST sequences (9)

CB390623.1 mixed P
CB394445.1 mixed P
BJ755683.1 Clone yk1417a08 mixed 5' read P
BJ772047.1 Clone yk1725a07 mixed 5' read P
BJ774831.1 Clone yk1358a12 mixed 3' read P
BJ779883.1 Clone yk1417a08 mixed 3' read P
BJ796547.1 Clone yk1725a07 mixed 3' read P
EC029403.1 Clone 1420263 unknown developmental stage P
EC030839.1 Clone 1784802 unknown developmental stage P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help