4-HydroxyPhenylpyruvate Dioxygenase (HPD) (hpd-1)

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Finding cDNAs

UGID:51559 UniGene Cel.10002 Caenorhabditis elegans (nematode) hpd-1

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4-HydroxyPhenylpyruvate Dioxygenase (HPD) (hpd-1)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_499324.1	4-HydroxyPhenylpyruvate Dioxygenase (HPD) family member (hpd-1)	C. elegans	100.0	392
NP_730536.1	CG11796, isoform A	D. melanogaster	71.0	379
NP_957461.1	4-hydroxyphenylpyruvate dioxygenase	D. rerio	69.1	382
NP_032303.1	4-hydroxyphenylpyruvate dioxygenase	M. musculus	68.2	381
NP_001104220.1	hypothetical protein LOC100126650	X. laevis	67.9	382
NP_002141.1	4-hydroxyphenylpyruvate dioxygenase	H. sapiens	67.2	381
XP_328269.1	hypothetical protein	N. crassa	59.3	387

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	cDNA Sources:	mixed; L1 larva; unknown developmental stage; L2 larva; L4 larva; embryo

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:

III

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (1)

NM_066923.5

Caenorhabditis elegans 4-HydroxyPhenylpyruvate Dioxygenase (HPD) family member (hpd-1) (hpd-1) mRNA, complete cds

EST sequences (10 of 46) [Show all sequences]

CB386568.1		mixed		P
CB405839.1		mixed		P
BJ762665.1	Clone yk1590c05	mixed	5' read	P
BJ763054.1	Clone yk1595a04	mixed	5' read	P
BJ763063.1	Clone yk1595b02	mixed	5' read	P
BJ787459.1	Clone yk1595a04	mixed	3' read	P
BJ787465.1	Clone yk1595b02	mixed	3' read	P
BJ793774.1	Clone yk1692c08	mixed	3' read	P
BJ807503.1	Clone yk1642f09	L4 larva	5' read	P
BJ816074.1	Clone yk1562a05	L4 larva	3' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria