Chromosome 1 open reading frame 57 ortholog (C28H1orf57)

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Finding cDNAs

UGID:1053290 UniGene Bt.23506 Bos taurus (cow) C28H1orf57

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Chromosome 1 open reading frame 57 ortholog (C28H1orf57)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_001069284.1	hypothetical protein LOC521103	B. taurus	100.0	189
NP_115700.1	hypothetical protein LOC84284	H. sapiens	90.5	189
NP_079912.1	nucleoside-triphosphatase C1orf57	M. musculus	83.6	189
NP_001003463.1	hypothetical protein LOC445069	D. rerio	67.0	184
NP_649279.2	CG10581	D. melanogaster	49.4	172
XP_001692060.1	hypothetical protein CHLREDRAFT_100906	C. reinhardtii	48.3	173

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	cDNA Sources:	mixed; brain; rumen; uncharacterized tissue; reticulum; uterus; lymphoreticular; pineal gland; lung; kidney; cartilage; pancreas; ovary; liver; intestine; extraembryonic tissue

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	28
	UniSTS entry:		(n/a)

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

	BC116158.1	Bos taurus chromosome 1 open reading frame 57 ortholog, mRNA (cDNA clone MGC:140669 IMAGE:8273057), complete cds	PA
	NM_001075816.1	Bos taurus chromosome 1 open reading frame 57 ortholog (C28H1orf57), mRNA	PA

EST sequences (10 of 67) [Show all sequences]

AW486072.1		mixed	5' read
AW632224.1		mixed	5' read	P
BE477357.1		mixed	5' read
BE486304.1		mixed	5' read
AV590684.1	Clone E1BR014A08	brain	3' read	P
AV590685.1	Clone E1BR014A08	brain	5' read	P
AV593486.1	Clone E1CA007H09	cartilage	3' read
AV593487.1	Clone E1CA007H09	cartilage	5' read	P
BE589654.1		mixed	5' read	P
BE682611.1		mixed	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria