BAM4 (BETA-AMYLASE 4); beta-amylase/ catalytic/ cation binding (BAM4)

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Finding cDNAs

UGID:2790180 UniGene At.71092 Arabidopsis thaliana (thale cress) BAM4

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BAM4 (BETA-AMYLASE 4); beta-amylase/ catalytic/ cation binding (BAM4)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_568829.2	BAM4 (BETA-AMYLASE 4); beta-amylase/ catalytic/ cation binding	A. thaliana	100.0	530
XP_001696500.1	beta-amylase	C. reinhardtii	45.9	394

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources.
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	unspecified tissue; mixed; silique; inflorescence; whole plant

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

AY045834.1	Arabidopsis thaliana putative beta-amylase (At5g55700) mRNA, complete cds	PA
NM_124952.4	Arabidopsis thaliana BAM4/BMY6 (BETA-AMYLASE 4); beta-amylase (BAM4/BMY6) mRNA, complete cds	P
BT001909.1	Arabidopsis thaliana clone C105465 putative beta-amylase (At5g55700) mRNA, complete cds	P
BX833995.1	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL89ZB03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress)	P
BX833993.1	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL89ZA03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress)	P
AK317617.1	Arabidopsis thaliana AT5G55700 mRNA, partial cds, clone: RAFL09-07-B18	PA

EST sequences (10 of 17) [Show all sequences]

AV557533.1	Clone SQ071b12F	silique	3' read	A
AI996210.1	Clone 701550606	inflorescence		P
AV784388.1	Clone RAFL05-19-B03	whole plant	3' read	P
BP610769.1	Clone RAFL16-12-L24	unspecified tissue	3' read	P
BP634618.1	Clone RAFL17-35-B07	unspecified tissue	3' read	P
BP663933.1	Clone RAFL21-49-P15	unspecified tissue	3' read
BP808837.1	Clone RAFL24-19-F01	unspecified tissue	5' read	P
BP808734.1	Clone RAFL24-18-P11	unspecified tissue	5' read	P
BP831044.1	Clone RAFL22-87-L12	mixed	5' read
BP859373.1	Clone RAFL25-40-H03	unspecified tissue	5' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria