AT3G55840 hypothetical protein (AT3G55840)

NCBI

UniGene
Homepage
FAQs
Query Tips
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
dbEST
Trace Archive

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs

UGID:2669803 UniGene At.70251 Arabidopsis thaliana (thale cress) AT3G55840

Links

AT3G55840 hypothetical protein (AT3G55840)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_191143.1	unknown protein	A. thaliana	100.0	427

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources.
	cDNA Sources:	mixed; whole plant; leaf; root; vegetative tissue; unspecified tissue

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

AY034950.1	Arabidopsis thaliana putative nematode resistance protein (At3g55840) mRNA, complete cds	PA
AY070026.1	Arabidopsis thaliana putative nematode resistance protein (At3g55840) mRNA, complete cds	P
NM_115442.2	Arabidopsis thaliana unknown protein (AT3G55840) mRNA, complete cds	P
AY085394.1	Arabidopsis thaliana clone 149697 mRNA, complete sequence	P
DQ132634.1	Arabidopsis thaliana AKINbetagamma-interacting protein 1 mRNA, complete cds	P

EST sequences (15)

AI996644.1	Clone 701667764	root		P
AI997619.1	Clone 701669383	leaf
AU227619.1	Clone RAFL15-14-B09	mixed	3' read
AV783127.1	Clone RAFL05-05-M16	whole plant	3' read	P
AV810258.1	Clone RAFL09-63-D12	whole plant	3' read	P
AV822378.1	Clone RAFL05-05-M16	whole plant	5' read	P
BX834396.1	Clone GSLTLS12ZD12	vegetative tissue	3' read
BP664103.1	Clone RAFL21-50-I08	unspecified tissue	3' read
BP786009.1	Clone RAFL07-97-E12	whole plant	3' read
DR283080.1	Clone 12753	mixed	5' read
DR283081.1	Clone 112417	mixed	5' read
DR298911.1	Clone 149697	mixed	5' read	P
DR298912.1	Clone 1340736	mixed	5' read	P
DR380927.1	Clone 149697	mixed	3' read	PA
EH817637.1		mixed

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria