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Finding cDNAs
UGID:1050386     UniGene At.48402     Arabidopsis thaliana (thale cress)   AT1G80290 Links
Glycosyltransferase family protein 47 (AT1G80290)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_001077854.1 glycosyltransferase family protein 47 A. thaliana 100.0 336
XP_001693086.1 FAD synthetase C. reinhardtii 50.7 209

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
cDNA Sources: mixed; unspecified tissue; whole plant; flower; silique
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

NM_106678.2 Arabidopsis thaliana glycosyltransferase family protein 47 (AT1G80290) mRNA, complete cds P
AY084439.1 Arabidopsis thaliana clone 108322 mRNA, complete sequence P
BT005721.1 Arabidopsis thaliana clone RAFL16-03-A19 (R50177) PA
BX814509.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB77ZG09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) P
BX814299.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB66ZH05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) P
BX817751.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL3ZB08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) P
BX817392.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL1ZC06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) P
BT024721.1 Arabidopsis thaliana At1g80290 mRNA, complete cds P
AK228676.1 Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL16-03-A19 PA
NM_001084385.1 Arabidopsis thaliana glycosyltransferase family protein 47 (AT1G80290) mRNA, complete cds P
AK317465.1 Arabidopsis thaliana AT1G80290 mRNA, complete cds, clone: RAFL24-07-F15 PA

EST sequences (15)

AV562573.1 Clone SQ172b12F silique 3' read P
AU228197.1 Clone RAFL16-03-A19 unspecified tissue 3' read P
BP585333.1 Clone RAFL15-02-D02 mixed 3' read P
BP586110.1 Clone RAFL15-05-A21 mixed 3' read P
BP588205.1 Clone RAFL15-45-H06 mixed 3' read P
BP596700.1 Clone RAFL15-36-G11 mixed 3' read P
BP796812.1 Clone RAFL06-16-B19 whole plant 5' read P
BP805799.1 Clone RAFL24-07-F15 unspecified tissue 5' read
DR269992.1 Clone 158836 mixed 5' read P
DR269993.1 Clone 108322 mixed 5' read P
DR379286.1 Clone 108322 mixed 3' read PA
EH796747.1 mixed
EH865973.1 mixed
EL999955.1 flower
ES135455.1 flower


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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