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Finding cDNAs
UGID:12591     UniGene At.27404     Arabidopsis thaliana (thale cress)   AT5G23870 Links
Pectinacetylesterase family protein (AT5G23870)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_974827.1 pectinacetylesterase family protein A. thaliana 100.0 450

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
cDNA Sources: whole plant; unspecified tissue; mixed; silique; flower; leaf
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 5
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

AY062706.1 Arabidopsis thaliana pectinacetylesterase (At5g23870; MRO11.9) mRNA, complete cds PA
NM_122292.3 Arabidopsis thaliana pectinacetylesterase family protein (AT5G23870) mRNA, complete cds PA
AY093369.1 Arabidopsis thaliana pectinacetylesterase (At5g23870) mRNA, complete cds P
BX832076.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH4ZG06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) P
BX830678.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS13ZG01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) P
NM_203098.1 Arabidopsis thaliana pectinacetylesterase family protein (AT5G23870) mRNA, complete cds PA
NM_203097.1 Arabidopsis thaliana pectinacetylesterase family protein (AT5G23870) mRNA, complete cds PA
AK316872.1 Arabidopsis thaliana AT5G23870 mRNA, complete cds, clone: RAFL11-10-I16 PA

EST sequences (14)

AV557820.1 Clone SQ080g10F silique 3' read P
AI999149.1 Clone 701554618 leaf P
AV795993.1 Clone RAFL09-06-B14 whole plant 3' read P
AV820479.1 Clone RAFL11-10-I16 whole plant 3' read P
AV826657.1 Clone RAFL09-06-B14 whole plant 5' read P
AV831211.1 Clone RAFL09-86-M05 whole plant 5' read
BP602349.1 Clone RAFL16-54-G09 unspecified tissue 3' read
BP805824.1 Clone RAFL24-07-H04 unspecified tissue 5' read P
BP852420.1 Clone RAFL25-19-M23 unspecified tissue 5' read P
DR279078.1 Clone 1162330 mixed 5' read P
DR279079.1 Clone 1350743 mixed 5' read P
DR384148.1 Clone 1350743 mixed 3' read P
ES172610.1 flower
ES159757.1 flower


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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