IRX9 (IRREGULAR XYLEM 9); transferase, transferring glycosyl groups / xylosyltransferase (IRX9)

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Finding cDNAs

UGID:12228 UniGene At.26964 Arabidopsis thaliana (thale cress) IRX9

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IRX9 (IRREGULAR XYLEM 9); transferase, transferring glycosyl groups / xylosyltransferase (IRX9)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_181246.1	IRX9 (IRREGULAR XYLEM 9); transferase, transferring glycosyl groups / xylosyltransferase	A. thaliana	100.0	350

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources.
	cDNA Sources:	silique; mixed; unspecified tissue; other

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

NM_129265.2	Arabidopsis thaliana IRX9 (IRREGULAR XYLEM 9); transferase, transferring glycosyl groups / xylosyltransferase (IRX9) mRNA, complete cds	P
BT015044.1	Arabidopsis thaliana At2g37090 gene, complete cds	P
BT015838.1	Arabidopsis thaliana At2g37090 gene, complete cds	P

EST sequences (13)

AA650986.1	Clone 162L8XP	mixed	3' read	PA
T42465.1	Clone 113J16T7	mixed		P
AA395064.1	Clone 113J16XP	mixed	3' read	A
BE520680.1	Clone M14B9	other	5' read	P
AV558546.1	Clone SQ101f09F	silique	3' read	P
AV559190.1	Clone SQ112g07F	silique	3' read
AV562912.1	Clone SQ178b01F	silique	3' read	PA
AV564152.1	Clone SQ199g07F	silique	3' read	A
AV565149.1	Clone SQ218d03F	silique	3' read	P
AV565161.1	Clone SQ218e11F	silique	3' read	P
R30453.1	Clone 162L8T7	mixed		P
AI993027.1	Clone 701494933	unspecified tissue		P
AI994078.1	Clone 701498546	unspecified tissue		P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria