TCH3 (TOUCH 3); calcium ion binding (TCH3)

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UGID:3473 UniGene At.269 Arabidopsis thaliana (thale cress) TCH3

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TCH3 (TOUCH 3); calcium ion binding (TCH3)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_181643.1	TCH3 (TOUCH 3); calcium ion binding	A. thaliana	100.0	323
NP_031615.1	calmodulin 2	M. musculus	63.8	148
NP_503386.1	CalModulin family member (cmd-1)	C. elegans	63.8	148
NP_523710.1	calmodulin, isoform A	D. melanogaster	63.8	148
NP_892012.1	calmodulin 2, gamma	D. rerio	63.8	148
NP_001080864.1	calmodulin 2	X. laevis	63.8	148
NP_001734.1	calmodulin 2	H. sapiens	63.8	148
XP_001703420.1	calmodulin	C. reinhardtii	58.7	155
XP_961276.2	calmodulin	N. crassa	58.4	148

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources.
	cDNA Sources:	mixed; unspecified tissue; whole plant; leaf; root

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

AF424577.1	Arabidopsis thaliana At2g41100/T3K9.13 mRNA, complete cds	PA
NM_129675.4	Arabidopsis thaliana TCH3 (TOUCH 3) (TCH3) mRNA, complete cds	P
AY120719.1	Arabidopsis thaliana calmodulin-like protein (At2g41100) mRNA, complete cds	P
BT000036.1	Arabidopsis thaliana calmodulin-like protein (At2g41100) mRNA, complete cds	P
NM_180012.2	Arabidopsis thaliana TCH3 (TOUCH 3) (TCH3) mRNA, complete cds	P
BX818994.1	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB35ZD08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	P
BX820390.1	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH29ZA11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress)	P
BT011896.1	Arabidopsis thaliana At2g41100 mRNA sequence	P
NM_001036446.1	Arabidopsis thaliana TCH3 (TOUCH 3) (TCH3) mRNA, complete cds	P
AK319038.1	Arabidopsis thaliana AT2G41100 mRNA, complete cds, clone: RAFL22-82-C22	A

EST sequences (10 of 174) [Show all sequences]

N97207.1	Clone 246F18T7	mixed
BE662892.1	Clone AtAOzC28	leaf
BE662933.1	Clone AtAOzD56	leaf		P
BE662975.1	Clone AtAOzF68	leaf
N38224.1	Clone 221D18T7	mixed		P
AV536907.1	Clone pAZNII0680R	whole plant	5' read	P
AV536988.1	Clone pAZNII0769R	whole plant	5' read
AV544165.1	Clone RZ35b01F	root	3' read	P
AV552641.1	Clone RZ35b01R	root	5' read	P
AV783672.1	Clone RAFL05-12-B21	whole plant	3' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria