Fringe-related protein (AT3G11420)

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UGID:12210 UniGene At.26897 Arabidopsis thaliana (thale cress) AT3G11420

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Fringe-related protein (AT3G11420)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_187749.1	fringe-related protein	A. thaliana	100.0	504

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources.
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	mixed; whole plant; root; unspecified tissue; leaf; vegetative tissue; silique

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

NM_111975.4	Arabidopsis thaliana fringe-related protein (AT3G11420) mRNA, complete cds	P
AY128392.1	Arabidopsis thaliana unknown protein (At3g11420) mRNA, complete cds	P
AK118188.1	Arabidopsis thaliana mRNA for unknown protein, complete cds, clone: RAFL19-51-A09	P
BT010376.1	Arabidopsis thaliana At3g11420 mRNA, complete cds	P
BX822121.1	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB14ZF10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	P
BX822627.1	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB54ZC01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	P

EST sequences (10 of 28) [Show all sequences]

AA650998.1	Clone 166C2XP	mixed	3' read	PA
R30585.1	Clone 166C2T7	mixed
W43136.1	Clone 247J21T7	mixed		P
AV546877.1	Clone RZL21a12F	root	3' read	PA
AV556621.1	Clone SQ048a12F	silique	3' read	PA
AI994576.1	Clone 701498623	unspecified tissue		P
AI996554.1	Clone 701667419	root		P
AU230306.1	Clone RAFL19-51-A09	mixed	3' read
AV796200.1	Clone RAFL09-06-P14	whole plant	3' read	P
AV826756.1	Clone RAFL09-06-P14	whole plant	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria