Pectinacetylesterase, putative (AT5G45280)

NCBI

UniGene
Homepage
FAQs
Query Tips
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
dbEST
Trace Archive

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs

UGID:10673 UniGene At.24293 Arabidopsis thaliana (thale cress) AT5G45280

Links

Pectinacetylesterase, putative (AT5G45280)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_199341.1	pectinacetylesterase, putative	A. thaliana	100.0	390

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources.
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	mixed; unspecified tissue; whole plant; root; leaf; silique; seed

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

AY057665.1	Arabidopsis thaliana AT5g45280/K9E15_6 mRNA, complete cds	PA
AY056198.1	Arabidopsis thaliana putative pectin acetylesterase (At5g45280) mRNA, complete cds	PA
NM_123896.3	Arabidopsis thaliana pectinacetylesterase, putative (AT5G45280) mRNA, complete cds	PA
AY087860.1	Arabidopsis thaliana clone 39005 mRNA, complete sequence	PA
AY150453.1	Arabidopsis thaliana putative pectin acetylesterase (At5g45280) mRNA, complete cds	P
NM_180804.1	Arabidopsis thaliana pectinacetylesterase, putative (AT5G45280) mRNA, complete cds	PA
BX831894.1	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH37ZH11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress)	P
AK221164.1	Arabidopsis thaliana mRNA for pectin acetylesterase, partial cds, clone: RAFL22-96-I06	PA

EST sequences (10 of 54) [Show all sequences]

AV537303.1	Clone RZ02e12F	root	3' read	P
AV549044.1	Clone RZ02e12R	root	5' read	P
AV564189.1	Clone SQ200e01F	silique	3' read	P
T41817.1	Clone 108L22T7	mixed		P
AI998703.1	Clone 701546624	leaf		P
AV790776.1	Clone RAFL07-07-E07	whole plant	3' read	A
AV806401.1	Clone RAFL09-46-H01	whole plant	3' read	PA
AV813909.1	Clone RAFL09-80-N01	whole plant	3' read	PA
AV825260.1	Clone RAFL07-07-E07	whole plant	5' read	P
CB259621.1	Clone MPIZp770F099Q	whole plant	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria