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Finding cDNAs
UGID:10569     UniGene At.24142     Arabidopsis thaliana (thale cress)   AT5G39990 Links
Glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein (AT5G39990)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_198815.1 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein A. thaliana 100.0 446

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
cDNA Sources: mixed; unspecified tissue; root; whole plant; silique
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 5
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

NM_123362.4 Arabidopsis thaliana glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein (AT5G39990) mRNA, complete cds P
BT006493.1 Arabidopsis thaliana At5g39990 gene, complete cds P
BX831825.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH31ZD08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) P
BX833173.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL37ZG02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) P
BX832085.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH50ZE11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) P
AK227442.1 Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL14-08-I04 PA

EST sequences (15)

AV544336.1 Clone RZ40c02F root 3' read P
AV555586.1 Clone SQ019a10F silique 3' read A
H37495.1 Clone 182F22T7 mixed P
AI995052.1 Clone 701501617 unspecified tissue P
AU226088.1 Clone RAFL14-08-I04 root 3' read
AV808441.1 Clone RAFL09-54-L23 whole plant 3' read
CB261983.1 Clone MPIZp767M1916Q whole plant 5' read P
BP602785.1 Clone RAFL16-56-A01 unspecified tissue 3' read
BP621830.1 Clone RAFL16-43-E11 unspecified tissue 3' read
DR242217.1 Clone 148273 mixed 5' read P
DR242218.1 Clone 271372 mixed 5' read P
DR242219.1 Clone 105097 mixed 5' read P
DR379046.1 Clone 105097 mixed 3' read PA
EH882721.1 mixed
EL046758.1 mixed


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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