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UGID:10379     UniGene At.23883     Arabidopsis thaliana (thale cress)   AT3G56310 Links
Alpha-galactosidase, putative / melibiase, putative / alpha-D-galactoside galactohydrolase, putative (AT3G56310)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_191190.2 alpha-galactosidase, putative / melibiase, putative / alpha-D-galactoside galactohydrolase, putative A. thaliana 100.0 436
XP_001690006.1 alpha-galactosidase C. reinhardtii 55.8 327
NP_001085328.1 N-acetylgalactosaminidase, alpha- X. laevis 49.1 344
NP_038491.2 alpha-galactosidase A M. musculus 48.6 331
NP_001032465.1 alpha-N-acetylgalactosaminidase D. rerio 48.6 216
NP_506031.1 GAlactosidase/N-Acetylgalactosaminidase family member (gana-1) C. elegans 47.7 375
NP_000253.1 alpha-N-acetylgalactosaminidase precursor H. sapiens 47.6 357
NP_609354.1 CG5731 D. melanogaster 46.1 371

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mixed; unspecified tissue; whole plant; flower; root; vegetative tissue; leaf; other; inflorescence; seed
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 3
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (20)

NM_115489.5 Arabidopsis thaliana alpha-galactosidase, putative / melibiase, putative / alpha-D-galactoside galactohydrolase, putative (AT3G56310) mRNA, complete cds P
AY074321.1 Arabidopsis thaliana putative alpha-galactosidase (At3g56310) mRNA, complete cds PA
AY114020.1 Arabidopsis thaliana putative alpha-galactosidase (At3g56310) mRNA, complete cds P
BX824543.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH55ZC05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) P
BX822543.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB47ZF09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) P
BX822739.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB60ZF05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) P
BX825040.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH90ZH12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) P
BX822949.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB75ZB02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) P
BX823822.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS7ZD12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) P
BX823782.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS75ZB02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) P
BX823606.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS56ZB03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) P
BX823461.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS40ZG10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) P
BX823316.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS21ZH04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) P
BX823260.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS18ZC02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) P
BX823219.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS12ZB05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) P
BX826044.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL81ZB07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) P
BX825512.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL41ZD07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) P
BX824990.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH89ZA05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) P
BX824901.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH81ZA03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) P
NM_202718.2 Arabidopsis thaliana alpha-galactosidase, putative / melibiase, putative / alpha-D-galactoside galactohydrolase, putative (AT3G56310) mRNA, complete cds P

EST sequences (10 of 92) [Show all sequences]

T04018.1 Clone B73TP whole plant P
AA712154.1 Clone 181E21T7 mixed P
N96684.1 Clone G2F6T7 seed P
T21536.1 Clone 93P9T7 mixed P
T42733.1 Clone 116E5T7 mixed P
T46055.1 Clone 134N1T7 mixed P
AA586069.1 Clone 62A5XP mixed 3' read P
AA651546.1 Clone 272D8T7 mixed P
T22415.1 Clone 105B11T7 mixed P
N37894.1 Clone 213D14T7 mixed P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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