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UGID:9428     UniGene At.22576     Arabidopsis thaliana (thale cress)   P40 Links
P40; structural constituent of ribosome (P40)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_177381.1 P40; structural constituent of ribosome A. thaliana 100.0 297
XP_001702485.1 ribosomal protein Sa, component of cytosolic 80S ribosome and 40S small subunit C. reinhardtii 77.3 264
NP_476750.1 stubarista, isoform A D. melanogaster 69.5 213
XP_322651.1 hypothetical protein N. crassa 64.6 277
NP_001012321.1 ribosomal protein SA H. sapiens 63.7 278
XP_484006.1 PREDICTED: hypothetical protein M. musculus 62.9 283
NP_957346.1 ribosomal protein SA D. rerio 62.4 303
NP_001080730.1 laminin receptor 1 (ribosomal protein SA, 67 kDA) X. laevis 61.6 294
NP_013149.1 Protein component of the small (40S) ribosomal subunit, nearly identical to Rps0Ap; required for maturation of 18S rRNA along with Rps0Ap; deletion of either RPS0 gene reduces growth rate, deletion of both genes is lethal; Rps0bp S. cerevisiae 59.5 251
NP_497978.1 Ribosomal Protein, Small subunit family member (rps-0) C. elegans 56.4 274

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
cDNA Sources: mixed; root; unspecified tissue; whole plant; flower; silique; bud; inflorescence; floral meristem; leaf; other; cell culture; seed
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (17)

X69056.1 A.thaliana mRNA for laminin receptor homologue P
U01955.1 Arabidopsis thaliana Columbia laminin receptor-like protein mRNA, complete cds PA
AY054211.1 Arabidopsis thaliana At1g72370/T10D10_16 mRNA, complete cds P
AY058885.1 Arabidopsis thaliana At1g72370/T10D10_16 mRNA, complete cds P
AY065096.1 Arabidopsis thaliana putative 40S ribosomal protein SA (laminin receptor-like protein) (At1g72370; T10D10.16) mRNA, complete cds P
NM_105896.3 Arabidopsis thaliana P40 (40S ribosomal protein SA); structural constituent of ribosome (P40) mRNA, complete cds P
AY079041.1 Arabidopsis thaliana At1g72370/T10D10_16 mRNA, complete cds P
AY087976.1 Arabidopsis thaliana clone 40091 mRNA, complete sequence P
AY114561.1 Arabidopsis thaliana putative 40S ribosomal protein SA (laminin receptor-like protein) (At1g72370) mRNA, complete cds P
AY136324.1 Arabidopsis thaliana putative 40S ribosomal protein SA (laminin receptor-like protein) (At1g72370) mRNA, complete cds P
BT000421.1 Arabidopsis thaliana putative 40S ribosomal protein SA (laminin receptor-like protein) (At1g72370) mRNA, complete cds P
BX817196.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH91ZG07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) P
BX816779.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH67ZH07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) P
BX815045.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS27ZF04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) P
BX814998.1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS23ZA01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) P
NM_001036190.2 Arabidopsis thaliana P40 (40S ribosomal protein SA); structural constituent of ribosome (P40) mRNA, complete cds P
AK316989.1 Arabidopsis thaliana AT1G72370 mRNA, complete cds, clone: RAFL14-48-B17 PA

EST sequences (10 of 738) [Show all sequences]

H76487.1 Clone 196J17T7 mixed P
N37223.1 Clone 207M3T7 mixed P
N95903.1 Clone F5G11T7 mixed P
T20405.1 Clone 78G5T7 mixed P
R83959.1 Clone 91N20T7 mixed P
T42073.1 Clone 110F24T7 mixed P
T44019.1 Clone 120P8T7 mixed P
T44092.1 Clone 122G21T7 mixed P
N37813.1 Clone 210N5T7 mixed P
N38422.1 Clone 217B20T7 mixed P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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