Calmodulin-like calcium-binding protein, 22 kDa (CaBP-22) (AT2G41090)

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UGID:6158 UniGene At.12547 Arabidopsis thaliana (thale cress) AT2G41090

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Calmodulin-like calcium-binding protein, 22 kDa (CaBP-22) (AT2G41090)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_181642.1	calmodulin-like calcium-binding protein, 22 kDa (CaBP-22)	A. thaliana	100.0	190
NP_031615.1	calmodulin 2	M. musculus	88.6	148
NP_503386.1	CalModulin family member (cmd-1)	C. elegans	88.6	148
NP_523710.1	calmodulin, isoform A	D. melanogaster	88.6	148
NP_892012.1	calmodulin 2, gamma	D. rerio	88.6	148
NP_001080864.1	calmodulin 2	X. laevis	88.6	148
NP_001734.1	calmodulin 2	H. sapiens	88.6	148
XP_001703420.1	calmodulin	C. reinhardtii	86.7	143
XP_961276.2	calmodulin	N. crassa	82.5	148
NP_009667.1	Calmodulin; Ca++ binding protein that regulates Ca++ independent processes (mitosis, bud growth, actin organization, endocytosis, etc.) and Ca++ dependent processes (stress-activated pathways), targets include Nuf1p, Myo2p and calcineurin; Cmd1p	S. cerevisiae	59.3	145

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources.
	cDNA Sources:	mixed; whole plant; unspecified tissue; leaf

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

Z12136.1	A.thaliana mRNA for calcium binding protein	PA
AY046044.1	Arabidopsis thaliana putative calcium binding protein CaBP-22 (At2g41090) mRNA, complete cds	PA
NM_129674.3	Arabidopsis thaliana calmodulin-like calcium-binding protein, 22 kDa (CaBP-22) (AT2G41090) mRNA, complete cds	P
AY084987.1	Arabidopsis thaliana clone 123659 mRNA, complete sequence	PA
AM422556.1	Arabidopsis thaliana mRNA for Z-box binding factor 3 (zbf3 gene)	PA
AK318913.1	Arabidopsis thaliana AT2G41090 mRNA, complete cds, clone: RAFL21-26-P07	A

EST sequences (10 of 66) [Show all sequences]

BE038554.1		leaf	5' read	A
T14180.1	Clone 48H11T7	mixed		P
AI997841.1	Clone 701670951	leaf		P
AV791045.1	Clone RAFL07-08-J03	whole plant	3' read	P
AV804348.1	Clone RAFL09-38-M12	whole plant	3' read	P
AV805122.1	Clone RAFL09-41-M09	whole plant	3' read
AV807430.1	Clone RAFL09-50-G09	whole plant	3' read	P
AV810929.1	Clone RAFL09-65-P04	whole plant	3' read	P
AV814489.1	Clone RAFL09-83-C21	whole plant	3' read	P
AV825348.1	Clone RAFL07-08-J03	whole plant	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria