Ictalurus punctatus: UniGene Build #1
|
Sequences Included in UniGene
| Known genes are from GenBank 13 May 2009
| ESTs are from dbEST through 13 May 2009
|
|
| 755 | | mRNAs | | 0 | | Models | | 389 | | HTC | | 139,924 | | EST, 3'reads | | 168,785 | | EST, 5'reads | | 339 | | EST, other/unknown | 
| | 310,192 | | total sequences in clusters |
Build Method: Transcript Based |
|
Alignments between all transcript sequences are used to generate clusters of sequences originating from the same gene.
More...
|
|
Final Number of Clusters (sets)
|
|
| 24,932 | | sets total | | 558 | | sets contain at least one mRNA | | 344 | | sets contain at least one HTC sequence | | 24,708 | | sets contain at least one EST | | 336 | | sets contain both mRNAs and ESTs |
|
Histogram of cluster sizes for UniGene Ipu build 1
|
|
| 4097-8192 | | 2 | | 2049-4096 | | 4 | | 1025-2048 | | 9 | | 513-1024 | | 24 | | 257-512 | | 57 | | 129-256 | | 126 | | 65-128 | | 328 | | 33-64 | | 986 | | 17-32 | | 2062 | | 9-16 | | 3245 | | 5-8 | | 4507 | | 3-4 | | 5964 | | 2 | | 3376 | | 1 | | 4242 |
|
| |
|
|
NCBI
»
UniGene
»
Protein
