NCBI » UniGene » Danio rerio

PubMed Protein Genome Structure PopSet Taxonomy OMIM

Search   UniGene All Databases Danio rerio: UniGene Build #117 Lineage: cellular organisms; Eukaryota; Fungi/Metazoa group; Metazoa; Eumetazoa; Bilateria; Coelomata; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Elopocephala; Clupeocephala; Otocephala; Ostariophysi; Otophysi; Cypriniphysi; Cypriniformes; Cyprinoidea; Cyprinidae; Rasborinae; Danio; Danio rerio Sequences Included in UniGene Known genes are from GenBank 15 Aug 2009 ESTs are from dbEST through 15 Aug 2009 40,944   mRNAs 10,134   Models 250   HTC 270,222   EST, 3'reads 801,777   EST, 5'reads 219,738   EST, other/unknown 1,343,065   total sequences in clusters Build Method: Genome Based Alignments between transcript sequences and genomic sequences are used to generate clusters of sequences originating from the same gene. More... Final Number of Clusters (sets) 51,481   sets total 15,544   sets contain at least one mRNA 244   sets contain at least one HTC sequence 50,714   sets contain at least one EST 14,778   sets contain both mRNAs and ESTs Histogram of cluster sizes for UniGene Dr build 117 8193-16384   4 4097-8192   6 2049-4096   23 1025-2048   68 513-1024   175 257-512   453 129-256   993 65-128   2314 33-64   3768 17-32   4693 9-16   5165 5-8   5589 3-4   6303 2   8584 1   13343 Zebrafish (Danio rerio) has been used since the late 1800s as a model system for genetic analysis and vertebrate development. UniGene Links Library Browser DDD Query Tips FAQ Finding cDNAs Related Databases Gene HomoloGene dbEST Trace Archive NIH cDNA Projects CGAP MGC ZGC XGC

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