NCBI » UniGene » Danio rerio

PubMed Protein Genome Structure PopSet Taxonomy OMIM

Search   UniGene All Databases Danio rerio: UniGene Build #126 Lineage: cellular organisms; Eukaryota; Fungi/Metazoa group; Metazoa; Eumetazoa; Bilateria; Coelomata; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Elopocephala; Clupeocephala; Otocephala; Ostariophysi; Otophysi; Cypriniphysi; Cypriniformes; Cyprinoidea; Cyprinidae; Rasborinae; Danio; Danio rerio Sequences Included in UniGene Known genes are from GenBank 19 Jun 2012 ESTs are from dbEST through 19 Jun 2012 42,691   mRNAs 873   Models 260   HTC 272,416   EST, 3'reads 782,883   EST, 5'reads 214,624   EST, other/unknown 1,313,747   total sequences in clusters Build Method: Genome Based Alignments between transcript sequences and genomic sequences are used to generate clusters of sequences originating from the same gene. More... Final Number of Clusters (sets) 53,558   sets total 16,140   sets contain at least one mRNA 251   sets contain at least one HTC sequence 52,586   sets contain at least one EST 15,169   sets contain both mRNAs and ESTs Histogram of cluster sizes for UniGene Dr build 126 Cluster size   Number of clusters 8193-16384   4 4097-8192   8 2049-4096   23 1025-2048   74 513-1024   172 257-512   442 129-256   1004 65-128   2247 33-64   3524 17-32   4273 9-16   4453 5-8   4931 3-4   5107 2   4591 1   22705 Zebrafish (Danio rerio) has been used since the late 1800s as a model system for genetic analysis and vertebrate development. UniGene Links Clusters Library Browser DDD Query Tips FAQ Finding cDNAs Other Links Genome Projects Gene HomoloGene EST SRA NIH cDNA Projects CGAP MGC ZGC XGC

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