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Drosophila melanogaster: UniGene Build #65

Lineage: cellular organisms; Eukaryota; Fungi/Metazoa group; Metazoa; Eumetazoa; Bilateria; Coelomata; Protostomia; Panarthropoda; Arthropoda; Mandibulata; Pancrustacea; Hexapoda; Insecta; Dicondylia; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Schizophora; Acalyptratae; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophilina; Drosophiliti; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster

Sequences Included in UniGene
Known genes are from GenBank 30 Apr 2009
ESTs are from dbEST through 30 Apr 2009

43,152 mRNAs
0 Models
73 HTC
46,436 EST, 3'reads
535,705 EST, 5'reads
122,210 EST, other/unknown

747,576 total sequences in clusters

Build Method: Genome Based

Alignments between transcript sequences and genomic sequences are used to generate clusters of sequences originating from the same gene.
More...


Final Number of Clusters (sets)

17,331 sets total
14,563 sets contain at least one mRNA
58 sets contain at least one HTC sequence
15,957 sets contain at least one EST
13,189 sets contain both mRNAs and ESTs



Histogram of cluster sizes for UniGene Dm build 65
2049-4096 3
1025-2048 11
513-1024 75
257-512 259
129-256 1043
65-128 2015
33-64 2394
17-32 2342
9-16 2521
5-8 2068
3-4 1295
2 1153
1 2152




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