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Acyrthosiphon pisum: UniGene Build #15

Lineage: cellular organisms; Eukaryota; Fungi/Metazoa group; Metazoa; Eumetazoa; Bilateria; Coelomata; Protostomia; Panarthropoda; Arthropoda; Mandibulata; Pancrustacea; Hexapoda; Insecta; Dicondylia; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidiformes; Aphidomorpha; Aphidoidea; Aphididae; Aphidinae; Macrosiphini; Acyrthosiphon; Acyrthosiphon pisum

Sequences Included in UniGene
Known genes are from GenBank 16 Aug 2009
ESTs are from dbEST through 16 Aug 2009

4,659 mRNAs
5,607 Models
45 HTC
41,600 EST, 3'reads
92,911 EST, 5'reads
5,747 EST, other/unknown

150,569 total sequences in clusters

Build Method: Transcript Based

Alignments between all transcript sequences are used to generate clusters of sequences originating from the same gene.
More...


Final Number of Clusters (sets)

13,918 sets total
3,062 sets contain at least one mRNA
45 sets contain at least one HTC sequence
13,318 sets contain at least one EST
2,462 sets contain both mRNAs and ESTs



Histogram of cluster sizes for UniGene Aps build 15
1025-2048 1
513-1024 5
257-512 12
129-256 41
65-128 233
33-64 623
17-32 1346
9-16 2109
5-8 2734
3-4 2518
2 1700
1 2596




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