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Caenorhabditis elegans: UniGene Build #45

Lineage: cellular organisms; Eukaryota; Fungi/Metazoa group; Metazoa; Eumetazoa; Bilateria; Pseudocoelomata; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans

Sequences Included in UniGene
Known genes are from GenBank 29 Aug 2009
ESTs are from dbEST through 29 Aug 2009

26,246 mRNAs
0 Models
47 HTC
109,719 EST, 3'reads
138,257 EST, 5'reads
78,176 EST, other/unknown

352,445 total sequences in clusters

Build Method: Genome Based

Alignments between transcript sequences and genomic sequences are used to generate clusters of sequences originating from the same gene.
More...


Final Number of Clusters (sets)

22,102 sets total
20,029 sets contain at least one mRNA
31 sets contain at least one HTC sequence
18,130 sets contain at least one EST
16,057 sets contain both mRNAs and ESTs



Histogram of cluster sizes for UniGene Cel build 45
2049-4096 2
1025-2048 11
513-1024 14
257-512 89
129-256 219
65-128 614
33-64 1469
17-32 2367
9-16 2886
5-8 3576
3-4 4393
2 1936
1 4526




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