|
Sequences Included in UniGene
|
Known genes are from GenBank 01 Dec 2008
|
ESTs are from dbEST through 01 Dec 2008
|
|
| 157 | | mRNAs |
| 0 | | Models |
| 0 | | HTC |
| 11,856 | | EST, 3'reads |
| 12,018 | | EST, 5'reads |
| 192,578 | | EST, other/unknown |
|
| 216,609 | | total sequences in clusters |
Build Method: Genome Based |
|
Alignments between transcript sequences and genomic sequences are used to generate clusters of sequences originating from the same gene.
More...
|
|
Final Number of Clusters (sets)
|
|
| 10,180 | | sets total |
| 151 | | sets contain at least one mRNA |
| 0 | | sets contain at least one HTC sequence |
| 10,175 | | sets contain at least one EST |
| 146 | | sets contain both mRNAs and ESTs |
|
Histogram of cluster sizes for UniGene Ncr build 12
|
|
| 2049-4096 | | 6 |
| 1025-2048 | | 10 |
| 513-1024 | | 25 |
| 257-512 | | 114 |
| 129-256 | | 145 |
| 65-128 | | 248 |
| 33-64 | | 511 |
| 17-32 | | 830 |
| 9-16 | | 1176 |
| 5-8 | | 1416 |
| 3-4 | | 1372 |
| 2 | | 1363 |
| 1 | | 2964 |
|
NCBI
»
UniGene
»
PubMed
Protein
