Dictyostelium discoideum: UniGene Build #20
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Sequences Included in UniGene
| Known genes are from GenBank 02 Feb 2008
| ESTs are from dbEST through 02 Feb 2008
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| 593 | | mRNAs | | 0 | | Models | | 0 | | HTC | | 60,986 | | EST, 3'reads | | 42,150 | | EST, 5'reads | | 13,651 | | EST, other/unknown | 
| | 117,380 | | total sequences in clusters |
Build Method: Genome Based |
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Alignments between transcript sequences and genomic sequences are used to generate clusters of sequences originating from the same gene.
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Final Number of Clusters (sets)
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| 5,957 | | sets total | | 559 | | sets contain at least one mRNA | | 0 | | sets contain at least one HTC sequence | | 5,900 | | sets contain at least one EST | | 502 | | sets contain both mRNAs and ESTs |
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Histogram of cluster sizes for UniGene Ddi build 20
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| 4097-8192 | | 1 | | 2049-4096 | | 2 | | 1025-2048 | | 7 | | 513-1024 | | 17 | | 257-512 | | 31 | | 129-256 | | 83 | | 65-128 | | 165 | | 33-64 | | 312 | | 17-32 | | 470 | | 9-16 | | 650 | | 5-8 | | 876 | | 3-4 | | 949 | | 2 | | 844 | | 1 | | 1550 |
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