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Takifugu rubripes: UniGene Build #7

Lineage: cellular organisms; Eukaryota; Fungi/Metazoa group; Metazoa; Eumetazoa; Bilateria; Coelomata; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Elopocephala; Clupeocephala; Euteleostei; Neognathi; Neoteleostei; Eurypterygii; Ctenosquamata; Acanthomorpha; Euacanthomorpha; Holacanthopterygii; Acanthopterygii; Euacanthopterygii; Percomorpha; Tetraodontiformes; Tetraodontoidei; Tetradontoidea; Tetraodontidae; Takifugu; Takifugu rubripes

Sequences Included in UniGene
Known genes are from GenBank 10 Aug 2008
ESTs are from dbEST through 10 Aug 2008

1,139 mRNAs
0 Models
0 HTC
2,177 EST, 3'reads
8,492 EST, 5'reads
6,784 EST, other/unknown

18,592 total sequences in clusters

Build Method: Transcript Based

Alignments between all transcript sequences are used to generate clusters of sequences originating from the same gene.
More...


Final Number of Clusters (sets)

3,809 sets total
580 sets contain at least one mRNA
0 sets contain at least one HTC sequence
3,358 sets contain at least one EST
129 sets contain both mRNAs and ESTs



Histogram of cluster sizes for UniGene Tru build 7
257-512 1
129-256 7
65-128 16
33-64 35
17-32 125
9-16 183
5-8 432
3-4 972
2 642
1 1396




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