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Mus musculus: UniGene Build #181

Lineage: cellular organisms; Eukaryota; Fungi/Metazoa group; Metazoa; Eumetazoa; Bilateria; Coelomata; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus musculus

Sequences Included in UniGene
Known genes are from GenBank 30 Jul 2009
ESTs are from dbEST through 30 Jul 2009

95,390 mRNAs
3,181 Models
125,409 HTC
1,447,706 EST, 3'reads
2,185,020 EST, 5'reads
358,004 EST, other/unknown

4,214,710 total sequences in clusters

Build Method: Genome Based

Alignments between transcript sequences and genomic sequences are used to generate clusters of sequences originating from the same gene.
More...


Final Number of Clusters (sets)

78,617 sets total
22,295 sets contain at least one mRNA
29,742 sets contain at least one HTC sequence
76,369 sets contain at least one EST
20,273 sets contain both mRNAs and ESTs



Histogram of cluster sizes for UniGene Mm build 181
8193-16384 3
4097-8192 11
2049-4096 75
1025-2048 253
513-1024 1060
257-512 3118
129-256 4813
65-128 4076
33-64 3789
17-32 4169
9-16 5786
5-8 8201
3-4 11505
2 9750
1 22008




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