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Sequence Set Browser


NZ_AAYB00000000.1 Roseobacter sp. CCS2

# of Scaffolds: 11
BioProject: PRJNA224116
BioSample: SAMN02436102
Assembly: GCF_000169435.1
Keywords: WGS
Annotation: Scaffolds
Organism: Roseobacter sp. CCS2show lineagehide lineage
/mol_type = genomic
/strain = CCS2
WGS: AAYB01000001:AAYB01000011
Scaffolds: NZ_AAYB01000001:NZ_AAYB01000011
11 scaffolds, 3,474 proteins, total length is 3,497,325 bases
Submitted (05-MAR-2007) J Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850, USA – show 10 authorshide authors
Mary Ann,M.A., Ferriera,S., Johnson,J., Kravitz,S., Beeson,K., Sutton,G., Rogers,Y.-H., Friedman,R., Frazier,M., Venter,J.C.

The Roseobacter sp. CCS2 whole genome shotgun (WGS) project has the project accession NZ_AAYB00000000. This version of the project (01) has the accession number NZ_AAYB01000000, and consists of sequences AAYB01000001-AAYB01000011.

Annotation was added by the NCBI Prokaryotic Genomes Automatic Annotation Pipeline Group. Information about the Pipeline can be found here: Please be aware that the annotation is done automatically with little or no manual curation.

Annotation Provider : NCBI
Annotation Date : 08/12/2015 20:12:57
Annotation Pipeline : NCBI Prokaryotic Genome Annotation Pipeline
Annotation Method : Best-placed reference protein set; GeneMarkS+
Annotation Software revision : 3.0
Features Annotated : Gene; CDS; rRNA; tRNA; ncRNA; repeat_region
Genes : 3,551
CDS : 3,474
Pseudo Genes : 35
rRNAs : 1, 1, 1 ( 5S, 16S, 23S )
complete rRNAs : 1, 1, 1 ( 5S, 16S, 23S )
partial rRNAs :
tRNAs : 38
ncRNA : 1
Frameshifted Genes : 10
Frameshifted Genes On Monomer Runs : 0
Frameshifted Genes Not On Monomer Runs : 0