JNVC00000000.2 Metabacillus indicus
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# of Contigs: 24 # of Proteins: 3,781 Total length: 4,072,175 bp BioProject: PRJNA252001 BioSample: SAMN02848465 Keywords: WGS Annotation: Contigs Organism: Metabacillus indicus – show lineagehide lineage Biosource: /collection_date = Oct-2013/country = South Korea/culture_collection = DSM:16189/isolation_source = fermented seafood/mol_type = genomic/strain = DSM 16189/type_material = type strain of Bacillus cibiWGS: JNVC02000001:JNVC02000024 Reference: Bacillus cibi sp. nov., isolated from jeotgal, a traditional Korean fermented seafood : Int. J. Syst. Evol. Microbiol. 55 (PT 2), 733-736 (2005) – Yoon,J.H., Lee,C.H., Oh,T.K.Reference: Genome-based reclassification of Bacillus cibi as a later heterotypic synonym of Bacillus indicus and emended description of Bacillus indicus : Int. J. Syst. Evol. Microbiol. 64 (PT 11), 3804-3809 (2014) – Stropko,S.J., Pipes,S.E., Newman,J.D.Submission: Submitted (12-JUN-2014) Biology, Lycoming College, 700 College Place, Williamsport, PA 17701, USA – Stropko,S.J., Pipes,S.E., Newman,J.D.Submission: Submitted (15-JUL-2014) Biology, Lycoming College, 700 College Place, Williamsport, PA 17701, USA – Stropko,S.J., Pipes,S.E., Newman,J.D.On Jul 22, 2014 this sequence version replaced gi:657189130.
The Metabacillus indicus whole genome shotgun (WGS) project has the project accession JNVC00000000. This version of the project (02) has the accession number JNVC02000000, and consists of sequences JNVC02000001-JNVC02000024.
Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
##Genome-Annotation-Data-START## Annotation Provider : NCBI Annotation Date : 07/18/2014 17:30:41 Annotation Pipeline : NCBI Prokaryotic Genome Annotation Pipeline Annotation Method : Best-placed reference protein set; GeneMarkS+ Annotation Software revision : 2.6 (rev. 440435) Features Annotated : Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes : 3,884 CDS : 3,781 Pseudo Genes : 18 rRNAs : 15 ( 5S, 16S, 23S ) tRNAs : 69 ncRNA : 1 Frameshifted Genes : 12 ##Genome-Annotation-Data-END## ##Genome-Assembly-Data-START## Assembly Method : SoftGenetics NextGENe v. 2.3.4.2 Genome Representation : Full Expected Final Version : Yes Genome Coverage : 71.0x Sequencing Technology : Illumina MiSeq ##Genome-Assembly-Data-END## - Contigs
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Contigs:
GenBank:JNVC02.1.gbff.gz 2.6 MbFASTA:JNVC02.1.fsa_nt.gz 1.2 MbASN.1:JNVC02.1.bbs.gz 2.2 MbProteins:
GenPept:JNVC02.1.gnp.gz 1.3 MbFASTA:JNVC02.1.fsa_aa.gz 696.3 kb- History
Minor Version Create Date 1 07/22/2014 9 01/25/2020 10 01/25/2020 11 05/02/2020 12 05/04/2020 13 07/18/2020 14 01/18/2022 15 01/30/2022 16 01/31/2022