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Sequence Set Browser

 

BADR00000000.2 Clonorchis sinensis

Master
# of Contigs: 6,190
# of Proteins: 13,634
# of Scaffolds: 2,555
Total length: 547,104,041 bp
BioProject: PRJDA72781
BioSample: SAMD00036587
Keywords: WGS
Annotation: Scaffolds
Organism: Clonorchis sinensisshow lineagehide lineage
Biosource:
/isolate = henan
/mol_type = genomic
WGS: BADR02000001:BADR02006190
Scaffolds: DF142828:DF145382
2,555 scaffolds, 13,634 proteins, total length is 536,797,578 bases
Reference:
The genome and transcriptome of Clonorchis sinensis provide novel insights into parasitism of the carcinogenic liver fluke : Unpublished – show 29 authorshide authors
Wang,X., Huang,Y., Chen,W., Liu,H., Guo,L., Chen,Y., Luo,F., Zhou,W., Sun,J., Mao,Q., Liang,P., Zhou,C., Tian,Y., Men,J., Lv,X., Huang,L., Zhou,J., Hu,Y., Li,R., Zhang,F., Lei,H., Li,X., Hu,X., Liang,C., Wu,Z., Lahn,B., Xu,J., Li,X., Yu,X.
Reference:
The draft genome of the carcinogenic human liver fluke Clonorchis sinensis : Genome Biol. 12 (10), R107 (2011) – show 19 authorshide authors
Wang,X., Chen,W., Huang,Y., Sun,J., Men,J., Liu,H., Luo,F., Guo,L., Lv,X., Deng,C., Zhou,C., Fan,Y., Li,X., Huang,L., Hu,Y., Liang,C., Hu,X., Xu,J., Yu,X.
Submission:
Submitted (02-SEP-2011) Contact:Xiao Yun Wang Zhongshan School of Medicine, Sun Yat-sen University, Department of Parasitology; 74th Zhongshan 2nd Road, Guangzhou 510080, China – show 19 authorshide authors
Wang,X., Chen,W., Huang,Y., Sun,J., Men,J., Liu,H., Luo,F., Guo,L., Lv,X., Deng,C., Zhou,C., Fan,Y., Li,X., Huang,L., Hu,Y., Liang,C., Hu,X., Xu,J., Yu,X.
Submission:
Submitted (30-SEP-2011) Contact:Xiao Yun Wang Zhongshan School of Medicine, Sun Yat-sen University, Department of Parasitology; 74th Zhongshan 2nd Road, Guangzhou 510080, China – show 27 authorshide authors
Wang,X., Huang,Y., Chen,W., Liu,H., Guo,L., Chen,Y., Luo,F., Zhou,W., Sun,J., Mao,Q., Liang,P., Zhou,C., Tian,Y., Men,J., Lv,X., Huang,L., Zhou,J., Hu,Y., Li,R., Zhang,F., Lei,H., Li,X., Hu,X., Liang,C., Xu,J., Wu,Z., Yu,X.

On Oct 19, 2011 this sequence version replaced gi:345640483.

The Clonorchis sinensis whole genome shotgun (WGS) project has the project accession BADR00000000. This version of the project (02) has the accession number BADR02000000, and consists of sequences BADR02000001-BADR02006190.

##Genome-Assembly-Data-START##
Assembly Method : Celera assembler v. 6.1
Assembly Name : C_sinensis-2.0
Genome Coverage : 72x
Sequencing Technology : Illumina
##Genome-Assembly-Data-END##
Contigs
Download
GenBank:BADR02.1.gbff.gz 207.2 Mb
 BADR02.2.gbff.gz 20.3 Mb
FASTA:BADR02.1.fsa_nt.gz 148.1 Mb
 BADR02.2.fsa_nt.gz 14.1 Mb
ASN.1:BADR02.1.bbs.gz 119.4 Mb
 BADR02.2.bbs.gz 11.3 Mb