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Sequence Set Browser

 

AXMF00000000.1 Propionibacterium sp. KPL2005

Master
# of Contigs: 8
# of Proteins: 2,345
# of Scaffolds: 6
Total length: 2,568,592 bp
BioProject: PRJNA170373
BioSample: SAMN02597012
Keywords: WGS
Annotation: Contigs
Organism: Propionibacterium sp. KPL2005show lineagehide lineage
Biosource:
/mol_type = genomic
/strain = KPL2005
WGS: AXMF01000001:AXMF01000008
Scaffolds: KI515688:KI515693
6 scaffolds, total length is 2,569,252 bases
Reference:
The Genome Sequence of Propionibacterium sp. KPL2005 : Unpublished – show 39 authorshide authors
Earl,A., Ward,D., Feldgarden,M., Gevers,D., Jacobson,B., Goguen,K., Pagano,E., Lemon,K.P., Young,S.K., Zeng,Q., Gargeya,S., Fitzgerald,M., Abouelleil,A., Alvarado,L., Berlin,A.M., Chapman,S.B., Gainer-Dewar,J., Goldberg,J., Gnerre,S., Griggs,A., Gujja,S., Hansen,M., Howarth,C., Imamovic,A., Ireland,A., Larimer,J., McCowan,C., Murphy,C., Pearson,M., Poon,T.W., Priest,M., Roberts,A., Saif,S., Shea,T., Sykes,S., Wortman,J., Nusbaum,C., Birren,B., The Broad Institute Genomics Platform
Submission:
Submitted (15-OCT-2013) Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, MA 02142, USA – show 39 authorshide authors
Earl,A., Ward,D., Feldgarden,M., Gevers,D., Jacobson,B., Goguen,K., Pagano,E., Lemon,K.P., Young,S.K., Zeng,Q., Gargeya,S., Fitzgerald,M., Abouelleil,A., Alvarado,L., Berlin,A.M., Chapman,S.B., Gainer-Dewar,J., Goldberg,J., Gnerre,S., Griggs,A., Gujja,S., Hansen,M., Howarth,C., Imamovic,A., Ireland,A., Larimer,J., McCowan,C., Murphy,C., Pearson,M., Poon,T.W., Priest,M., Roberts,A., Saif,S., Shea,T., Sykes,S., Wortman,J., Nusbaum,C., Birren,B., The Broad Institute Genomics Platform

The Propionibacterium sp. KPL2005 whole genome shotgun (WGS) project has the project accession AXMF00000000. This version of the project (01) has the accession number AXMF01000000, and consists of sequences AXMF01000001-AXMF01000008.

This is a reference genome for the Human Microbiome Project. This project is co-owned with the Human Microbiome Project DACC. Source DNA provided by Beck Jacobson, Kelsey Goguen, Evan Pagano and Katherine P. Lemon (Molecular Genetics, The Forsyth Institute, Boston, MA 02115, USA). Bacteria provided by Beck Jacobson, Kelsey Goguen, Evan Pagano and Katherine P. Lemon (Molecular Genetics, The Forsyth Institute, Boston, MA 02115, USA). Please be aware that the annotation is done automatically with little or no manual curation. Gene Calling Method: Prodigal.

##Genome-Assembly-Data-START##
Finishing Goal : High-Quality Draft
Current Finishing Status : High-Quality Draft
Assembly Method : allpaths v. R46652
Assembly Name : Prop_sp_KPL2005_V1
Genome Coverage : 281.0x
Sequencing Technology : Illumina
##Genome-Assembly-Data-END##
Contigs
Proteins
Download
GenBank:AXMF01.1.gbff.gz 1.6 Mb
FASTA:AXMF01.1.fsa_nt.gz 764.2 kb
ASN.1:AXMF01.1.bbs.gz 1.2 Mb