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Sequence Set Browser


AWPP00000000.1 Escherichia coli M4

# of Contigs: 556
# of Proteins: 0
# of Scaffolds: 84
Total length: 5,264,062 bp
BioProject: PRJNA215830
BioSample: SAMN02335247
Keywords: WGS
Organism: Escherichia coli M4show lineagehide lineage
/mol_type = genomic
/strain = M4
WGS: AWPP01000001:AWPP01000556
Scaffolds: KI302157:KI302240
84 scaffolds, total length is 2,466,795 bases
Precise Dissection of an Escherichia coli O157:H7 outbreak by Single Nucleotide Polymorphism Analysis : J. Clin. Microbiol. (2013) In press – show 11 authorshide authors
Turabelidze,G., Lawrence,S.J., Gao,H., Sodergren,E., Weinstock,G., Abubucker,S., Wylie,T., Mitreva,M., Shaikh,N., Gautom,R., Tarr,P.I.
Submitted (20-AUG-2013) The Genome Institute, Washington University School of Medicine, 4444 Forest Park, St. Louis, MO 63108, USA – show 16 authorshide authors
Weinstock,G., Sodergren,E., Wollam,A., Fulton,L., Fulton,R., O'Laughlin,M., Fronick,C., Godfrey,J., Cordes,M., Miner,T., Appelbaum,E., Herter,B., Wylie,T., Lek,S., Mitreva,M., Wilson,R.K.

The Escherichia coli M4 whole genome shotgun (WGS) project has the project accession AWPP00000000. This version of the project (01) has the accession number AWPP01000000, and consists of sequences AWPP01000001-AWPP01000556.

Assembly Method : Velvet v. February 2013
Assembly Name : E_coliM4-1.0
Genome Coverage : 102x
Sequencing Technology : Illumina
GenBank:AWPP01.1.gbff.gz 2.2 Mb
FASTA:AWPP01.1.fsa_nt.gz 1.6 Mb
ASN.1:AWPP01.1.bbs.gz 1.3 Mb