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Shotgun Assembly Sequences: Genome (WGS) and Transcriptome (TSA)

 

AMNE00000000.1 Salmonella enterica subsp. enterica serovar Heidelberg str. N26457

Master
# of Contigs: 82
# of Proteins: 4,781
Total length: 5,002,231 bp
BioProject: PRJNA78483
BioSample: SAMN01088011
Keywords: WGS
Annotation: Contigs
Organism: Salmonella enterica subsp. enterica serovar Heidelberg str. N26457show lineagehide lineage
Biosource:
/collection_date = 2010
/country = USA: CO
/isolation_source = ground turkey
/mol_type = genomic
/serovar = Heidelberg
/strain = N26457
/sub_species = enterica
WGS: AMNE01000001:AMNE01000082
Reference:
Comparative genomic analysis and virulence differences in closely related salmonella enterica serotype heidelberg isolates from humans, retail meats, and animals : Genome Biol Evol 6 (5), 1046-1068 (2014) – show 15 authorshide authors
Hoffmann,M., Zhao,S., Pettengill,J., Luo,Y., Monday,S.R., Abbott,J., Ayers,S.L., Cinar,H.N., Muruvanda,T., Li,C., Allard,M.W., Whichard,J., Meng,J., Brown,E.W., McDermott,P.F.
Submission:
Submitted (28-JUN-2012) Center for Food Safety and Applied Nutrition, United States Food and Drug Administration, 5100 Paint Branch Parkway, College Park, MD 20740, USA – Strain,E.A., Brown,E., Allard,M.W., Luo,Y.L.

The Salmonella enterica subsp. enterica serovar Heidelberg str. N26457 whole genome shotgun (WGS) project has the project accession AMNE00000000. This version of the project (01) has the accession number AMNE01000000, and consists of sequences AMNE01000001-AMNE01000082.

Annotation was added by the NCBI Prokaryotic Genomes Automatic Annotation Pipeline Group. Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genomes/static/Pipeline.html. Please be aware that the annotation is done automatically with little or no manual curation. Bacterial culture available from Dwayne Roberson, FDA College Park Campus, 5100 Paint Branch Parkway, College Park, MD 20740.

##Genome-Assembly-Data-START##
Assembly Method : Newbler v. 2.6
Genome Coverage : 20x
Sequencing Technology : 454 Titanium
##Genome-Assembly-Data-END##
Contigs
Proteins
Download
GenBank:AMNE01.1.gbff.gz 3.4 Mb
FASTA:AMNE01.1.fsa_nt.gz 1.5 Mb
ASN.1:AMNE01.1.bbs.gz 2.7 Mb