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Sequence Set Browser

 

ACDU00000000.1 Allomyces macrogynus ATCC 38327

Master
# of Contigs: 8,973
# of Proteins: 19,446
# of Scaffolds: 101
Total length: 52,624,944 bp
BioProject: PRJNA20563
BioSample: SAMN02953744
Keywords: WGS
Annotation: Contigs, Scaffolds
Organism: Allomyces macrogynus ATCC 38327show lineagehide lineage
Biosource:
/culture_collection = ATCC:38327
/mol_type = genomic
/strain = ATCC 38327
WGS: ACDU01000001:ACDU01008973
Scaffolds: GG745328:GG745428
101 scaffolds, 19,446 proteins, total length is 57,060,573 bases
Reference:
The Genome Sequence of Allomyces macrogynus strain ATCC 38327 : Unpublished – show 47 authorshide authors
Russ,C., Cuomo,C., Shea,T., Young,S.K., Zeng,Q., Koehrsen,M., Haas,B., Borodovsky,M., Guigo,R., Alvarado,L., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Saif,S., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yandava,C., Burger,G., Gray,M.W., Holland,P.W.H., King,N., Lang,F.B.F., Roger,A.J., Ruiz-Trillo,I., Lander,E., Nusbaum,C., The Broad Institute Genome Sequencing Platform
Reference:
Annotation of Allomyces macrogynus ATCC 38327 : Unpublished – show 45 authorshide authors
Russ,C., Cuomo,C., Burger,G., Gray,M.W., Holland,P.W.H., King,N., Lang,F.B.F., Roger,A.J., Ruiz-Trillo,I., Young,S.K., Zeng,Q., Gargeya,S., Fitzgerald,M., Haas,B., Abouelleil,A., Alvarado,L., Arachchi,H.M., Berlin,A., Chapman,S.B., Gearin,G., Goldberg,J., Griggs,A., Gujja,S., Hansen,M., Heiman,D., Howarth,C., Larimer,J., Lui,A., MacDonald,P.J.P., McCowen,C., Montmayeur,A., Murphy,C., Neiman,D., Pearson,M., Priest,M., Roberts,A., Saif,S., Shea,T., Sisk,P., Stolte,C., Sykes,S., Wortman,J., Nusbaum,C., Birren,B., The Broad Institute Genome Sequencing Platform
Submission:
Submitted (05-NOV-2009) Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, MA 02142, USA – show 47 authorshide authors
Russ,C., Cuomo,C., Shea,T., Young,S.K., Zeng,Q., Koehrsen,M., Haas,B., Borodovsky,M., Guigo,R., Alvarado,L., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Saif,S., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yandava,C., Burger,G., Gray,M.W., Holland,P.W.H., King,N., Lang,F.B.F., Roger,A.J., Ruiz-Trillo,I., Lander,E., Nusbaum,C., The Broad Institute Genome Sequencing Platform

The Allomyces macrogynus ATCC 38327 whole genome shotgun (WGS) project has the project accession ACDU00000000. This version of the project (01) has the accession number ACDU01000000, and consists of sequences ACDU01000001-ACDU01008973.

Annotation was added to the scaffolds in July 2015.

##Genome-Assembly-Data-START##
Assembly Method : Assemblez v. 20080826
Assembly Name : A_macrogynus_V3
Genome Coverage : 7.31x
Sequencing Technology : ABI
##Genome-Assembly-Data-END##
Contigs
Download
GenBank:ACDU01.1.gbff.gz 22.9 Mb
FASTA:ACDU01.1.fsa_nt.gz 15.3 Mb
ASN.1:ACDU01.1.bbs.gz 17.2 Mb