The microbial mat metagenome whole genome shotgun (WGS) project has the project accession ABPT00000000. This version of the project (01) has the accession number ABPT01000000, and consists of sequences ABPT01000001-ABPT01015663.
Data will be made available at http://img.jgi.doe.gov/m
JGI Project ID:4001577
Contact:Philip Hugenholtz (PHugenholtz@lbl.gov)
habitat type:microbial mat; sampling site latitude:N27 41.345; sampling site longitude:W113.55.027; sampling site altitude:310 m AMSL; sample type:microbial mat; sample depth: 1m below water level, 4-5mm depth into the mat; Collection date: 13 Feb 2005; Collection time: about 2 pm; Ambient temperature: 15 C; pH: 6-9 (varies diurnally and through layers); Salinity of bulk water 90 ppt; Sulfate concentration of bulk water 80 mM
The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.
The very short contigs (those shorter than 151 bp) have been removed.
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