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Shotgun Assembly Sequences: Genome (WGS) and Transcriptome (TSA)

 

ABOK00000000.1 mosquito metagenome

Master
# of Contigs: 657,204
# of Proteins: 0
Total length: 65,895,997 bp
BioProject: PRJNA28467
BioSample: SAMN02954242
Keywords: WGS
Organism: mosquito metagenomeshow lineagehide lineage
Biosource:
/clone_lib = MosqDigSDVir060606
/collection_date = 06-Jun-2006
/environmental_sample
/host = mosquito
/isolation_source = viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA
/lat_lon = 33.462524 N 117.080650 W
/metagenomic
/mol_type = genomic genomic
WGS: ABOK01000001:ABOK01657204
Reference:
Functional metagenomic profiling of nine biomes : Nature 452 (7187), 629-632 (2008) – show 25 authorshide authors
Dinsdale,E.A., Edwards,R.A., Hall,D., Angly,F., Breitbart,M., Brulc,J.M., Furlan,M., Desnues,C., Haynes,M., Li,L., McDaniel,L., Moran,M.A., Nelson,K.E., Nilsson,C., Olson,R., Paul,J., Brito,B.R., Ruan,Y., Swan,B.K., Stevens,R., Valentine,D.L., Thurber,R.V., Wegley,L., White,B.A., Rohwer,F.
Submission:
Submitted (04-APR-2008) SDSU Center for Universal Microbial Sequencing, 5500 Campanile Dr., San Diego, CA 92182, USA – Edwards,R.A., Rohwer,F., Angly,F.

The mosquito metagenome whole genome shotgun (WGS) project has the project accession ABOK00000000. This version of the project (01) has the accession number ABOK01000000, and consists of sequences ABOK01000001-ABOK01657204.

Contigs
Download
GenBank:ABOK01.1.gbff.gz 24.5 Mb
 ABOK01.2.gbff.gz 22.8 Mb
 ABOK01.3.gbff.gz 1.1 Mb
FASTA:ABOK01.1.fsa_nt.gz 12.1 Mb
 ABOK01.2.fsa_nt.gz 11.2 Mb
 ABOK01.3.fsa_nt.gz 439.6 kb
ASN.1:ABOK01.1.bbs.gz 14.3 Mb
 ABOK01.2.bbs.gz 13 Mb
 ABOK01.3.bbs.gz 676.9 kb