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Sequence Set Browser

 

ABNJ00000000.1 mosquito metagenome

Master
# of Contigs: 340,098
# of Proteins: 0
Total length: 34,889,946 bp
BioProject: PRJNA28413
BioSample: SAMN02954241
Keywords: WGS
Organism: mosquito metagenomeshow lineagehide lineage
Biosource:
/clone_lib = MosqISDVir01252006
/collection_date = 25-Jan-2006
/environmental_sample
/host = mosquito
/isolation_source = viral fraction from mixed species mosquitoes collected at Buena Vista Lagoon in Oceanside, CA
/lat_lon = 32.934669 N 117.260559 W
/metagenomic
/mol_type = genomic genomic
WGS: ABNJ01000001:ABNJ01340098
Reference:
Functional metagenomic profiling of nine biomes : Nature 452 (7187), 629-632 (2008) – show 25 authorshide authors
Dinsdale,E.A., Edwards,R.A., Hall,D., Angly,F., Breitbart,M., Brulc,J.M., Furlan,M., Desnues,C., Haynes,M., Li,L., McDaniel,L., Moran,M.A., Nelson,K.E., Nilsson,C., Olson,R., Paul,J., Brito,B.R., Ruan,Y., Swan,B.K., Stevens,R., Valentine,D.L., Thurber,R.V., Wegley,L., White,B.A., Rohwer,F.
Submission:
Submitted (04-APR-2008) SDSU Center for Universal Microbial Sequencing, 5500 Campanile Dr., San Diego, CA 92182, USA – Edwards,R.A., Rohwer,F., Angly,F.

The mosquito metagenome whole genome shotgun (WGS) project has the project accession ABNJ00000000. This version of the project (01) has the accession number ABNJ01000000, and consists of sequences ABNJ01000001-ABNJ01340098.

Contigs
Download
GenBank:ABNJ01.1.gbff.gz 25 Mb
 ABNJ01.2.gbff.gz 837.4 kb
FASTA:ABNJ01.1.fsa_nt.gz 12.9 Mb
 ABNJ01.2.fsa_nt.gz 380 kb
ASN.1:ABNJ01.1.bbs.gz 14.3 Mb
 ABNJ01.2.bbs.gz 479.2 kb