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Sequence Set Browser

 

ABMY00000000.1 fish metagenome

Master
# of Contigs: 60,311
# of Proteins: 0
Total length: 5,955,843 bp
BioProject: PRJNA28391
BioSample: SAMN00000149
Keywords: WGS
Organism: fish metagenomeshow lineagehide lineage
Biosource:
/clone_lib = FishMorGutKentSTMic050406
/collection_date = 04-May-2006
/environmental_sample
/isolation_source = microbial fraction from gut contents of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish were sick at time of sampling
/lat_lon = 33.537594 N 116.097748 W
/metagenomic
/mol_type = genomic genomic
WGS: ABMY01000001:ABMY01060311
Reference:
Functional metagenomic profiling of nine biomes : Nature 452 (7187), 629-632 (2008) – show 25 authorshide authors
Dinsdale,E.A., Edwards,R.A., Hall,D., Angly,F., Breitbart,M., Brulc,J.M., Furlan,M., Desnues,C., Haynes,M., Li,L., McDaniel,L., Moran,M.A., Nelson,K.E., Nilsson,C., Olson,R., Paul,J., Brito,B.R., Ruan,Y., Swan,B.K., Stevens,R., Valentine,D.L., Thurber,R.V., Wegley,L., White,B.A., Rohwer,F.
Submission:
Submitted (04-APR-2008) SDSU Center for Universal Microbial Sequencing, 5500 Campanile Dr., San Diego, CA 92182, USA – Edwards,R.A., Rohwer,F., Angly,F.

The fish metagenome whole genome shotgun (WGS) project has the project accession ABMY00000000. This version of the project (01) has the accession number ABMY01000000, and consists of sequences ABMY01000001-ABMY01060311.

Contigs
Download
GenBank:ABMY01.1.gbff.gz 4.5 Mb
FASTA:ABMY01.1.fsa_nt.gz 2.3 Mb
ASN.1:ABMY01.1.bbs.gz 2.5 Mb