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Shotgun Assembly Sequences: Genome (WGS) and Transcriptome (TSA)

 

ABMH00000000.1 stromatolite metagenome

Master
# of Contigs: 328,656
# of Proteins: 0
Total length: 34,248,532 bp
BioProject: PRJNA28357
BioSample: SAMN00000132
Keywords: WGS
Organism: stromatolite metagenomeshow lineagehide lineage
Biosource:
/clone_lib = RMStromCCMexVir072205
/collection_date = 22-Jul-2005
/environmental_sample
/isolation_source = viral fraction from Rios Mesquites microbiolite in Cuatro Cienagas, Mexico
/lat_lon = 26.985876 N 102.066391 W
/metagenomic
/mol_type = genomic genomic
WGS: ABMH01000001:ABMH01328656
Reference:
Biodiversity and biogeography of phages in modern stromatolites and thrombolites : Nature 452 (7185), 340-343 (2008) – show 23 authorshide authors
Desnues,C., Rodriguez-Brito,B., Rayhawk,S., Kelley,S., Tran,T., Haynes,M., Liu,H., Furlan,M., Wegley,L., Chau,B., Ruan,Y., Hall,D., Angly,F.E., Edwards,R.A., Li,L., Thurber,R.V., Reid,R.P., Siefert,J., Souza,V., Valentine,D.L., Swan,B.K., Breitbart,M., Rohwer,F.
Reference:
Functional metagenomic profiling of nine biomes : Nature 452 (7187), 629-632 (2008) – show 25 authorshide authors
Dinsdale,E.A., Edwards,R.A., Hall,D., Angly,F., Breitbart,M., Brulc,J.M., Furlan,M., Desnues,C., Haynes,M., Li,L., McDaniel,L., Moran,M.A., Nelson,K.E., Nilsson,C., Olson,R., Paul,J., Brito,B.R., Ruan,Y., Swan,B.K., Stevens,R., Valentine,D.L., Thurber,R.V., Wegley,L., White,B.A., Rohwer,F.
Submission:
Submitted (04-APR-2008) SDSU Center for Universal Microbial Sequencing, 5500 Campanile Dr., San Diego, CA 92182, USA – Edwards,R.A., Rohwer,F., Angly,F.

The stromatolite metagenome whole genome shotgun (WGS) project has the project accession ABMH00000000. This version of the project (01) has the accession number ABMH01000000, and consists of sequences ABMH01000001-ABMH01328656.

Contigs
Download
GenBank:ABMH01.1.gbff.gz 26.1 Mb
 ABMH01.2.gbff.gz 1.3 Mb
FASTA:ABMH01.1.fsa_nt.gz 12.4 Mb
 ABMH01.2.fsa_nt.gz 586.8 kb
ASN.1:ABMH01.1.bbs.gz 14.6 Mb
 ABMH01.2.bbs.gz 721.9 kb