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Shotgun Assembly Sequences: Genome (WGS) and Transcriptome (TSA)


ABMH00000000.1 stromatolite metagenome

# of Contigs: 328,656
# of Proteins: 0
Total length: 34,248,532 bp
BioProject: PRJNA28357
BioSample: SAMN00000132
Keywords: WGS
Organism: stromatolite metagenomeshow lineagehide lineage
/clone_lib = RMStromCCMexVir072205
/collection_date = 22-Jul-2005
/isolation_source = viral fraction from Rios Mesquites microbiolite in Cuatro Cienagas, Mexico
/lat_lon = 26.985876 N 102.066391 W
/mol_type = genomic genomic
WGS: ABMH01000001:ABMH01328656
Biodiversity and biogeography of phages in modern stromatolites and thrombolites : Nature 452 (7185), 340-343 (2008) – show 23 authorshide authors
Desnues,C., Rodriguez-Brito,B., Rayhawk,S., Kelley,S., Tran,T., Haynes,M., Liu,H., Furlan,M., Wegley,L., Chau,B., Ruan,Y., Hall,D., Angly,F.E., Edwards,R.A., Li,L., Thurber,R.V., Reid,R.P., Siefert,J., Souza,V., Valentine,D.L., Swan,B.K., Breitbart,M., Rohwer,F.
Functional metagenomic profiling of nine biomes : Nature 452 (7187), 629-632 (2008) – show 25 authorshide authors
Dinsdale,E.A., Edwards,R.A., Hall,D., Angly,F., Breitbart,M., Brulc,J.M., Furlan,M., Desnues,C., Haynes,M., Li,L., McDaniel,L., Moran,M.A., Nelson,K.E., Nilsson,C., Olson,R., Paul,J., Brito,B.R., Ruan,Y., Swan,B.K., Stevens,R., Valentine,D.L., Thurber,R.V., Wegley,L., White,B.A., Rohwer,F.
Submitted (04-APR-2008) SDSU Center for Universal Microbial Sequencing, 5500 Campanile Dr., San Diego, CA 92182, USA – Edwards,R.A., Rohwer,F., Angly,F.

The stromatolite metagenome whole genome shotgun (WGS) project has the project accession ABMH00000000. This version of the project (01) has the accession number ABMH01000000, and consists of sequences ABMH01000001-ABMH01328656.

GenBank:ABMH01.1.gbff.gz 26.1 Mb
 ABMH01.2.gbff.gz 1.3 Mb
FASTA:ABMH01.1.fsa_nt.gz 12.4 Mb
 ABMH01.2.fsa_nt.gz 586.8 kb
ASN.1:ABMH01.1.bbs.gz 14.6 Mb
 ABMH01.2.bbs.gz 721.9 kb