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Shotgun Assembly Sequences: Genome (WGS) and Transcriptome (TSA)

 

AAFZ00000000.1 whale fall metagenome

Master
# of Contigs: 29,934
# of Proteins: 0
Total length: 30,862,440 bp
BioProject: PRJNA32355
BioSample: SAMN02954315
Keywords: WGS
Annotation: Contigs
Organism: whale fall metagenomeshow lineagehide lineage
Biosource:
/country = USA: Pacific Ocean, Santa Cruz Basin
/environmental_sample
/isolation_source = microbial mat from gray whale carcass in the Pacific Ocean (depth=1674 meters), Santa Cruz Basin (N33.30 W119.22)
/metagenomic
/mol_type = genomic
WGS: AAFZ01000001:AAFZ01029934
Reference:
Comparative metagenomics of microbial communities : Science 308 (5721), 554-557 (2005) – show 13 authorshide authors
Tringe,S.G., von Mering,C., Kobayashi,A., Salamov,A.A., Chen,K., Chang,H.W., Podar,M., Short,J.M., Mathur,E.J., Detter,J.C., Bork,P., Hugenholtz,P., Rubin,E.M.
Submission:
Submitted (18-FEB-2005) DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598, USA – show 14 authorshide authors
Tringe,S.G., von Mering,C., Kobayashi,A., Salamov,A.A., Chen,K., Chang,H.W., Podar,M., Short,J.M., Mathur,E.J., Detter,J.C., Bork,P., Hugenholtz,P., Rubin,E., DOE Joint Genome Institute

The whale fall metagenome whole genome shotgun (WGS) project has the project accession AAFZ00000000. This version of the project (01) has the accession number AAFZ01000000, and consists of sequences AAFZ01000001-AAFZ01029934.

URL -- http://www.jgi.doe.gov Contact: Susannah Tringe SGTringe@lbl.gov.

Contigs
Download
GenBank:AAFZ01.1.gbff.gz 13.8 Mb
FASTA:AAFZ01.1.fsa_nt.gz 9.8 Mb
ASN.1:AAFZ01.1.bbs.gz 26.2 Mb