AAEY00000000.1 Cryptococcus neoformans var. neoformans B-3501A
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# of Contigs: 70 # of Proteins: 6,578 # of Scaffolds/Chrs: 14 Total length: 18,519,482 bp BioProject: PRJNA12386 BioSample: SAMN02953604 Keywords: WGS Annotation: Contigs Organism: Cryptococcus neoformans var. neoformans B-3501A – show lineagehide lineage Biosource: /mol_type = genomic/serotype = D/strain = B-3501A/variety = neoformansWGS: AAEY01000001:AAEY01000070 Scaffolds: CM000040:CM000053 14 scaffolds, total length is 19,699,782 basesReference: The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans : Science 307 (5713), 1321-1324 (2005) – show 54 authorshide authorsLoftus,B.J., Fung,E., Roncaglia,P., Rowley,D., Amedeo,P., Bruno,D., Vamathevan,J., Miranda,M., Anderson,I.J., Fraser,J.A., Allen,J.E., Bosdet,I.E., Brent,M.R., Chiu,R., Doering,T.L., Donlin,M.J., D'Souza,C.A., Fox,D.S., Grinberg,V., Fu,J., Fukushima,M., Haas,B.J., Huang,J.C., Janbon,G., Jones,S.J., Koo,H.L., Krzywinski,M.I., Kwon-Chung,J.K., Lengeler,K.B., Maiti,R., Marra,M.A., Marra,R.E., Mathewson,C.A., Mitchell,T.G., Pertea,M., Riggs,F.R., Salzberg,S.L., Schein,J.E., Shvartsbeyn,A., Shin,H., Shumway,M., Specht,C.A., Suh,B.B., Tenney,A., Utterback,T.R., Wickes,B.L., Wortman,J.R., Wye,N.H., Kronstad,J.W., Lodge,J.K., Heitman,J., Davis,R.W., Fraser,C.M., Hyman,R.W.Submission: Submitted (08-JUL-2004) Stanford Genome Technology Center, 855 California Avenue, Palo Alto, CA 94304, USA – show 9 authorshide authorsFung,E., Hyman,R.W., Rowley,D., Bruno,D., Miranda,M., Fukushima,M., Wickes,B.L., Fu,J., Davis,R.W.The Cryptococcus neoformans var. neoformans B-3501A whole genome shotgun (WGS) project has the project accession AAEY00000000. This version of the project (01) has the accession number AAEY01000000, and consists of sequences AAEY01000001-AAEY01000070.
In Sept 2023 the genes of tRNAs that were on the minus strand were corrected so that the genes were also on the minus strand.
##Genome-Assembly-Data-START## Assembly Method : CAP4 v. unknown Genome Coverage : unknown Sequencing Technology : Sanger ##Genome-Assembly-Data-END## - Contigs
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Contigs:
GenBank:AAEY01.1.gbff.gz 10.8 MbFASTA:AAEY01.1.fsa_nt.gz 5.5 MbASN.1:AAEY01.1.bbs.gz 7.5 MbProteins:
GenPept:AAEY01.1.gnp.gz 3.6 MbFASTA:AAEY01.1.fsa_aa.gz 2.1 Mb- History
Minor Version Create Date 1 07/13/2004 8 12/16/2022 9 12/17/2022 10 12/23/2022 11 09/12/2023