The mine drainage metagenome whole genome shotgun (WGS) project has the project accession AADL00000000. This version of the project (01) has the accession number AADL01000000, and consists of sequences AADL01000110-AADL01002534.
URL -- http://www.jgi.doe.gov
Contact: Paul Richardson
An environmental sample consisting of an acid mine drainage microbial biofilm was obtained and sequenced. This has resulted in the culture-independent recovery of two near-complete microbial genomes and partial recovery of three other genomes. The scaffolds of these five genomes are:
DS995259-DS995275 (Leptospirillum sp. Group II '5-way CG')
CH003545-CH003921 (Leptospirillum sp. Group III)
CH003922-CH004070 (Ferroplasma acidarmanus Type I)
CH004071-CH004104 (Ferroplasma sp. Type II)
CH004105-CH004435 (Thermoplasmatales archaeon Gpl)
Additional Leptospirillum sp. Group II '5-way CG' sequences were identified and that genome was updated, as discussed in PubMed 18651792. Thus, contigs AADL01000001-AADL01000109 were replaced by contigs AADL01002456-AADL01002534 in August 2008, and scaffolds CH003520-CH003544 were replaced by scaffolds DS995259-DS995275 in September 2008. Scaffolds DS995259-DS995275 are annotated.
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