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Sequence Set Browser

 

AACS00000000.2 Coprinopsis cinerea okayama7#130

Master
# of Contigs: 68
# of Proteins: 13,356
Total length: 36,192,590 bp
BioProject: PRJNA1447
BioSample: SAMN02953595
Keywords: WGS
Annotation: Contigs
Organism: Coprinopsis cinerea okayama7#130show lineagehide lineage
Biosource:
/mol_type = genomic
/strain = okayama7#130
WGS: AACS02000001:AACS02000068
Reference:
Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus) : Proc. Natl. Acad. Sci. U.S.A. (2010) In press – show 49 authorshide authors
Stajich,J.E., Wilke,S.K., Ahren,D., Au,C.H., Birren,B.W., Borodovsky,M., Burns,C., Canback,B., Casselton,L.A., Cheng,C.K., Deng,J., Dietrich,F.S., Fargo,D.C., Farman,M.L., Gathman,A.C., Goldberg,J., Guigo,R., Hoegger,P.J., Hooker,J.B., Huggins,A., James,T.Y., Kamada,T., Kilaru,S., Kodira,C., Kues,U., Kupfer,D., Kwan,H.S., Lomsadze,A., Li,W., Lilly,W.W., Ma,L.J., Mackey,A.J., Manning,G., Martin,F., Muraguchi,H., Natvig,D.O., Palmerini,H., Ramesh,M.A., Rehmeyer,C.J., Roe,B.A., Shenoy,N., Stanke,M., Ter-Hovhannisyan,V., Tunlid,A., Velagapudi,R., Vision,T.J., Zeng,Q., Zolan,M.E., Pukkila,P.J.
Submission:
Submitted (25-JUL-2003) Whitehead Institute/MIT Center for Genome Research, 320 Charles Street, Cambridge, MA 02142, USA – show 213 authorshide authors
Birren,B., Nusbaum,C., Abebe,A., Abouelleil,A., Adekoya,E., Ait-zahra,M., Allen,N., Allen,T., An,P., Anderson,M., Anderson,S., Arachchi,H., Armbruster,J., Bachantsang,P., Baldwin,J., Barry,A., Bayul,T., Blitshsteyn,B., Bloom,T., Blye,J., Boguslavskiy,L., Borowsky,M., Boukhgalter,B., Brunache,A., Butler,J., Calixte,N., Calvo,S., Camarata,J., Campo,K., Chang,J., Cheshatsang,Y., Citroen,M., Collymore,A., Considine,T., Cook,A., Cooke,P., Corum,B., Cuomo,C., David,R., Dawoe,T., Degray,S., Dodge,S., Dooley,K., Dorje,P., Dorjee,K., Dorris,L., Duffey,N., Dupes,A., Elkins,T., Engels,R., Erickson,J., Farina,A., Faro,S., Ferreira,P., Fischer,H., Fitzgerald,M., Foley,K., Gage,D., Galagan,J., Gearin,G., Gnerre,S., Gnirke,A., Goyette,A., Graham,J., Grandbois,E., Gyaltsen,K., Hafez,N., Hagopian,D., Hagos,B., Hall,J., Hatcher,B., Heller,A., Higgins,H., Honan,T., Horn,A., Houde,N., Hughes,L., Hulme,W., Husby,E., Iliev,I., Jaffe,D., Jones,C., Kamal,M., Kamat,A., Kamvysselis,M., Karlsson,E., Kells,C., Kieu,A., Kisner,P., Kodira,C., Kulbokas,E., Labutti,K., Lama,D., Landers,T., Leger,J., Levine,S., Lewis,D., Lewis,T., Lindblad-toh,K., Liu,X., Lokyitsang,T., Lokyitsang,Y., Lucien,O., Lui,A., Ma,L.J., Mabbitt,R., Macdonald,J., Maclean,C., Major,J., Manning,J., Marabella,R., Maru,K., Matthews,C., Mauceli,E., Mccarthy,M., Mcdonough,S., Mcghee,T., Meldrim,J., Meneus,L., Mesirov,J., Mihalev,A., Mihova,T., Mikkelsen,T., Mlenga,V., Moru,K., Mozes,J., Mulrain,L., Munson,G., Naylor,J., Newes,C., Nguyen,C., Nguyen,N., Nguyen,T., Nicol,R., Nielsen,C., Nizzari,M., Norbu,C., Norbu,N., O'donnell,P., Okoawo,O., O'leary,S., Omotosho,B., O'neill,K., Osman,S., Parker,S., Perrin,D., Phunkhang,P., Piqani,B., Purcell,S., Rachupka,T., Ramasamy,U., Rameau,R., Ray,V., Raymond,C., Retta,R., Richardson,S., Rise,C., Rodriguez,J., Rogers,J., Rogov,P., Rutman,M., Schupbach,R., Seaman,C., Settipalli,S., Sharpe,T., Sheridan,J., Sherpa,N., Shi,J., Smirnov,S., Smith,C., Sougnez,C., Spencer,B., Stalker,J., Stange-thomann,N., Stavropoulos,S., Stetson,K., Stone,C., Stone,S., Stubbs,M., Talamas,J., Tchuinga,P., Tenzing,P., Tesfaye,S., Theodore,J., Thoulutsang,Y., Topham,K., Towey,S., Tsamla,T., Tsomo,N., Vallee,D., Vassiliev,H., Venkataraman,V., Vinson,J., Vo,A., Wade,C., Wang,S., Wangchuk,T., Wangdi,T., Whittaker,C., Wilkinson,J., Wu,Y., Wyman,D., Yadav,S., Yang,S., Yang,X., Yeager,S., Yee,E., Young,G., Zainoun,J., Zembeck,L., Zimmer,A., Zody,M., Lander,E.
Submission:
Submitted (11-JUN-2010) Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, MA 02142, USA – show 54 authorshide authors
Stajich,J.E., Pukkila,P., Dietrich,F., Farman,M., Gathman,A., Hoegger,P., Kilaru,S., Kues,U., Lilly,W., Mackey,A.J., Muraguchi,H., Rehmeyer,C., Stanke,M., Velagapudi,R., Wilke,S., Borodovsky,M., Guigo,R., Young,S.K., Kodira,C.D., Zeng,Q., Koehrsen,M., Alvarado,L., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yandava,C., Galagan,J., Nusbaum,C., Birren,B., The Broad Institute Genome Sequencing Platform

On Jun 16, 2010 this sequence version replaced gi:33347384.

The Coprinopsis cinerea okayama7#130 whole genome shotgun (WGS) project has the project accession AACS00000000. This version of the project (02) has the accession number AACS02000000, and consists of sequences AACS02000001-AACS02000068.

##Genome-Assembly-Data-START##
Assembly Name : CC3
Sequencing Technology : ABI; lab finishing
##Genome-Assembly-Data-END##
Contigs
Proteins
Download
GenBank:AACS02.1.gbff.gz 19.9 Mb
FASTA:AACS02.1.fsa_nt.gz 10.7 Mb
ASN.1:AACS02.1.bbs.gz 14.3 Mb