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Sequence Set Browser

 

AACM00000000.2 Fusarium graminearum PH-1

Master
# of Contigs: 435
# of Proteins: 13,313
# of Scaffolds: 37
Total length: 36,331,366 bp
BioProject: PRJNA13839
BioSample: SAMN02953593
Keywords: WGS
Annotation: Contigs, Scaffolds
Organism: Fusarium graminearum PH-1show lineagehide lineage
Biosource:
/mol_type = genomic
/strain = PH-1; NRRL 31084
WGS: AACM02000001:AACM02000435
Scaffolds: CM000574:CM000577, DS231663:DS231695
37 scaffolds, 13,313 proteins, total length is 72,912,738 bases
Reference:
The Fusarium graminearum genome reveals a link between localized polymorphism and pathogen specialization : Science 317 (5843), 1400-1402 (2007) – show 45 authorshide authors
Cuomo,C.A., Guldener,U., Xu,J.R., Trail,F., Turgeon,B.G., Di Pietro,A., Walton,J.D., Ma,L.J., Baker,S.E., Rep,M., Adam,G., Antoniw,J., Baldwin,T., Calvo,S., Chang,Y.L., Decaprio,D., Gale,L.R., Gnerre,S., Goswami,R.S., Hammond-Kosack,K., Harris,L.J., Hilburn,K., Kennell,J.C., Kroken,S., Magnuson,J.K., Mannhaupt,G., Mauceli,E., Mewes,H.W., Mitterbauer,R., Muehlbauer,G., Munsterkotter,M., Nelson,D., O'donnell,K., Ouellet,T., Qi,W., Quesneville,H., Roncero,M.I., Seong,K.Y., Tetko,I.V., Urban,M., Waalwijk,C., Ward,T.J., Yao,J., Birren,B.W., Kistler,H.C.
Submission:
Submitted (02-MAY-2003) Whitehead Institute/MIT Center for Genome Research, 320 Charles Street, Cambridge, MA 02142, USA – show 119 authorshide authors
Birren,B., Nusbaum,C., Abouelleil,A., Allen,N., Anderson,S., Arachchi,H.M., Barna,N., Bastien,V., Bloom,T., Boguslavkiy,L., Boukhgalter,B., Butler,J., Calvo,S.E., Camarata,J., Chang,J., Choepel,Y., Collymore,A., Cook,A., Cooke,P., Corum,B., DeArellano,K., Diaz,J.S., Dodge,S., Dooley,K., Dorris,L., Elkins,T., Engels,R., Erickson,J., Faro,S., Ferreira,P., FitzGerald,M., Gage,D., Galagan,J., Gardyna,S., Gnerre,S., Graham,L., Grand-Pierre,N., Hafez,N., Hagopian,D., Hagos,B., Hall,J., Horton,L., Hulme,W., Iliev,I., Jaffe,D., Johnson,R., Jones,C., Kamal,M., Kamat,A., Karatas,A., Kells,C., Landers,T., Levine,R., Lindblad-Toh,K., Liu,G., Lui,A., Ma,L.-J., Mabbitt,R., MacLean,C., Macdonald,P., Major,J., Manning,J., Matthews,C., Mauceli,E., McCarthy,M., Meldrim,J., Meneus,L., Mihova,T., Mlenga,V., Murphy,T., Naylor,J., Nguyen,C., Nicol,R., Nielsen,C.B., Norbu,C., O'Connor,T., O'Donnell,P., O'Neil,D., Oliver,J., Peterson,K., Phunkhang,P., Pierre,N., Purcell,S., Rachupka,A., Ramasamy,U., Raymond,C., Retta,R., Rise,C., Rogov,P., Roman,J., Schauer,S., Schupback,R., Seaman,S., Severy,P., Smirnov,S., Smith,C., Spencer,B., Stange-Thomann,N., Stojanovic,N., Stubbs,M., Talamas,J., Tesfaye,S., Theodore,J., Topham,K., Travers,M., Vassiliev,H., Venkataraman,V.S., Viel,R., Vo,A., Wang,S., Wilson,B., Wu,X., Wyman,D., Young,G., Zainoun,J., Zembek,L., Zimmer,A., Zody,M., Lander,E.
Submission:
Submitted (02-APR-2007) Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, MA 02142, USA – show 35 authorshide authors
Birren,B., Lander,E., Galagan,J., Nusbaum,C., Devon,K., Ma,L.-J., Jaffe,D., Butler,J., Alvarez,P., Gnerre,S., Grabherr,M., Kleber,M., Mauceli,E., Brockman,W., MacCallum,I.A., Young,S., LaButti,K., DeCaprio,D., Crawford,M., Koehrsen,M., Engels,R., Montgomery,P., Pearson,M., Howarth,C., Larson,L., White,J., O'Leary,S., Kodira,C., Zeng,Q., Yandava,C., Alvarado,L., Kistler,C., Xu,J.-R., Trail,F., The Broad Institute Genome Sequencing Platform

On Apr 11, 2007 this sequence version replaced gi:30475386.

The Fusarium graminearum PH-1 whole genome shotgun (WGS) project has the project accession AACM00000000. This version of the project (02) has the accession number AACM02000000, and consists of sequences AACM02000001-AACM02000435.

Annotation was added to the scaffolds in November 2013.

Contigs
Download
GenBank:AACM02.1.gbff.gz 15.6 Mb
FASTA:AACM02.1.fsa_nt.gz 10.8 Mb
ASN.1:AACM02.1.bbs.gz 9.6 Mb