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Whole Genome Shotgun (WGS) sequencing projects are incomplete genomes or incomplete chromosomes that are being sequenced by a whole genome shotgun strategy. WGS assemblies may be annotated, but annotation is not required. Transcriptome Shotgun Assembly (TSA) sequences are computationally assembled sequences from primary data such as ESTs, traces and Next Generation Sequencing Technologies. Please consult WGS Submission or TSA Submission pages for more details.

How to find a particular WGS/TSA sequence...Hide 'How to find...'
To find a particular WGS/TSA sequence, search on this page for the project that contains the sequence, then click on the 4-letter accession prefix in the "Prefix" column. On the specific WGS/TSA project page, navigate to the "Contigs" tab and use the "Search" box to find a particular sequence. The sequence records can be viewed in FASTA or GenBank format. You cannot search for multiple sequences at one time; each must be done individually. The complete project can be downloaded in GenBank, fasta, and ASN.1 formats from the "Download" tab.
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search by accession prefix, division, organism name, bioproject id or source db name.
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44 projects found. Show projects on page.
#PrefixProjectDivBioProjectBioSampleOrganismContigsScaffolds# of ProteinsCompleteUpdate DateCreate Date
#MbasesAnnot#MbasesAnnot
1AABR07WGSRODPRJNA10629SAMN02808228Rattus norvegicus73,5542,580.31,1245,645.72014-07-012014-06-30
2AAHX01WGSRODPRJNA13999SAMN03000701Rattus norvegicus503,4522,807.74,1235,123.8Y44,0592014-08-212005-07-08
3AAHY01WGSRODPRJNA11785SAMN03004379Mus musculus837,9633,003.146,5075,232.3Y45,4372014-08-262005-07-07
4AAKN02WGSRODPRJNA12583SAMN02981223Cavia porcellus61,6032,663.43,1432,723.22014-08-112008-02-20
5AAQQ01WGSRODPRJNA13937SAMN03000702Ictidomys tridecemlineatus797,4811,913.42014-08-212006-06-06
6AAXL01WGSRODPRJNA18687SAMN02981231Rattus norvegicus31,92827.22014-08-112007-04-10
7AAXM01WGSRODPRJNA18689SAMN02981232Rattus norvegicus23,01221.62014-08-112007-04-10
8AAXN01WGSRODPRJNA18691SAMN02981233Rattus norvegicus72,86748.72014-08-112007-04-10
9AAXO01WGSRODPRJNA18695SAMN02981234Rattus norvegicus27,47222.42014-08-112007-04-10
10AAXP01WGSRODPRJNA18693SAMN02981235Rattus norvegicus73,49750.22014-08-112007-04-10
11ABRO02WGSRODPRJNA20385SAMN02900551Dipodomys ordii148,2262,065.33,7662,055.92014-12-122014-12-09
12AEKQ02WGSRODPRJNA59879SAMN02981292Mus musculus191,5812,279.16962,501.42014-08-112012-08-14
13AEKR01WGSRODPRJNA59879SAMN02981292Mus musculus391,2732,256.933,0482,538.32014-08-112011-01-04
14AFSB01WGSRODPRJNA68323SAMN00217190Heterocephalus glaber273,9902,430.039,2662,644.0Y21,7582013-08-142011-10-12
15AFTD01WGSRODPRJNA69991SAMN02981352Cricetulus griseus265,7862,318.1109,1512,399.8Y24,2382014-08-112011-08-03
16AGCD01WGSRODPRJNA68239SAMN00632093Chinchilla lanigera81,6552,284.3Y9052,384.52013-11-062012-07-06
17AGTP01WGSRODPRJNA61725SAMN00210855Ictidomys tridecemlineatus153,4882,311.1Y6,0372,466.72013-11-012011-11-25
18AHBB01WGSRODPRJNA60381SAMN00190744Mus musculus240,4892,243.7Y2,9222,563.12013-04-052013-04-02
19AHKG01WGSRODPRJNA72441SAMN00714537Heterocephalus glaber114,6522,314.8Y1,0942,611.32015-02-182012-02-15
20AHZW01WGSRODPRJNA72443SAMN00727831Microtus ochrogaster187,0122,104.32,7023,935.02013-11-012012-12-03
21AJSA01WGSRODPRJNA74595SAMN00769067Octodon degus259,9042,526.2Y4,3622,989.52013-11-012012-04-19
22AKZC01WGSRODPRJNA72445SAMN00728442Jaculus jaculus337,3612,470.3Y5,3662,826.92013-11-012012-07-20
23AMDS01WGSRODPRJNA167053SAMN02981459Cricetulus griseus218,8622,301.37,4682,335.62014-08-112013-07-08
24APMK01WGSRODPRJNA189319SAMN02981520Cricetulus griseus319,2192,089.128,7492,332.8Y29,1442014-08-112013-08-08
25APMT01WGSRODPRJNA77669SAMN00769068Mesocricetus auratus237,6992,076.2Y6,4722,438.22013-03-292013-03-28
26AVPZ01WGSRODPRJNA212237SAMN02252454Cavia aperea3,1312,716.42014-01-232014-01-21
27AXCS01WGSRODPRJNA213569SAMN02299330Nannospalax galili356,0962,913.47,1442,984.22014-06-052014-04-04
28AYHN01WGSRODPRJNA53563SAMN00848614Peromyscus maniculatus bairdii212,9622,473.513,2212,607.42013-12-032013-11-26
29AYUG01WGSRODPRJNA190641SAMN02339281Fukomys damarensis162,5452,286.074,7302,333.9Y20,5482014-09-042014-08-22
30BAAG01WGSRODPRJDB1093Mus musculus1,237,6001,195.5Y2013-04-192013-04-19
31CAAA01WGSRODPRJNA13183SAMEA3138312Mus musculus224,7132,477.61900-01-012002-05-15
32CEEU01WGSRODPRJEB8272SAMEA3214822Marmota marmota marmota15,2162,514.02015-02-172015-02-13
33GAPM01TSARODPRJNA226588SAMN02361210Rattus norvegicus5.052015-07-202013-11-25
34GATN01TSARODPRJNA236159SAMN02628336Rattus norvegicus12.0Y122014-12-182014-02-13
35GATP01TSARODPRJNA236159SAMN02628335Mus musculus31.0Y2014-12-182014-02-13
36GBBH01TSARODPRJNA78823SAMN00991504Chinchilla lanigera230,216254.82014-04-022014-04-02
37GBCB01TSARODPRJNA78823SAMN00013501Chinchilla lanigera132,154127.22014-04-082014-04-08
38GBCC01TSARODPRJNA78823SAMN00991505Chinchilla lanigera54,69227.52014-04-082014-04-08
39GBCE01TSARODPRJNA78823SAMN00991506Chinchilla lanigera188,702216.42014-04-082014-04-08
40GBCQ01TSARODPRJNA78823SAMN00013536Chinchilla lanigera193,668200.62014-04-112014-04-11
41GBDF01TSARODPRJNA78823SAMN00013612Chinchilla lanigera308,433302.42014-04-212014-04-21
42GBDI01TSARODPRJNA78823SAMN00013656Chinchilla lanigera387,274518.62014-04-232014-04-23
43GBDJ01TSARODPRJNA78823SAMN00013603Chinchilla lanigera424,411492.72014-04-222014-04-22
44GBDK01TSARODPRJNA78823SAMN00013512Chinchilla lanigera434,289521.72014-04-222014-04-22