LOCUS ACYC01000009 7937 bp DNA linear PLN 31-JAN-2011
DEFINITION Grosmannia clavigera kw1407 contig_683.0, whole genome shotgun
sequence.
ACCESSION ACYC01000009 ACYC01000000
VERSION ACYC01000009.1
DBLINK BioProject: PRJNA39837
BioSample: SAMN02953765
KEYWORDS WGS.
SOURCE Grosmannia clavigera kw1407
ORGANISM Grosmannia clavigera kw1407
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina;
Sordariomycetes; Sordariomycetidae; Ophiostomatales;
Ophiostomataceae; Leptographium.
REFERENCE 1 (bases 1 to 7937)
AUTHORS Diguistini,S., Liao,N.Y., Platt,D., Robertson,G., Seidel,M.,
Chan,S.K., Docking,T.R., Birol,I., Holt,R.A., Hirst,M., Mardis,E.,
Marra,M.A., Hamelin,R.C., Bohlmann,J., Breuil,C. and Jones,S.J.
TITLE De novo genome sequence assembly of a filamentous fungus using
Sanger, 454 and Illumina sequence data
JOURNAL Genome Biol. 10 (9), R94 (2009)
PUBMED 19747388
REFERENCE 2 (bases 1 to 7937)
AUTHORS DiGuistini,S., Liao,N.Y., Platt,D., Robertson,G., Seidel,M.,
Chan,S.K., Docking,R., Birol,I., Holt,R.A., Hirst,M., Mardis,E.,
Marra,M.A., Hamelin,R.C., Bohlmann,J.R., Breuil,C. and Jones,S.J.M.
TITLE Direct Submission
JOURNAL Submitted (03-SEP-2009) BCGSC, BC Cancer Agency, 570 west 7th Ave,
Vancouver, BC V5Z 4S6, Canada
COMMENT WGS projects ACXQ00000000 and ACYC00000000 are assembled from the
same sequence reads using different methodologies. For
ACXQ00000000 (Sanger-454-IlluminaPA) raw Illumina PE reads were
assembled using Velvet, and 454 and Sanger reads were assembled
with Forge. The two sets of contigs were then combined. For
ACYC00000000 (Sanger-454-IlluminaDA) there was no pre-assembly.
Filtered genomic DNA reads from Sanger, 454 and Illumina were
assembled using the Forge genome assembler.
Assembly Name: Sanger-454-IlluminaDA
Genome Coverage: 50x
Sequencing Technology: Sanger; 454; Illumina.
FEATURES Location/Qualifiers
source 1..7937
/organism="Grosmannia clavigera kw1407"
/mol_type="genomic DNA"
/submitter_seqid="contig_683.0"
/strain="kw1407"
/culture_collection="UAMH:11150"
/db_xref="taxon:655863"
ORIGIN
1 taagtaataa tatttaagtg tattttagca actagtatac ttctctcttt tatatagttt
61 tataggtaat ttagttcagt aataatactt ttagccttac ttaaaaacaa atataatact
121 tagtagttta ttataatgtt tttaagtaaa ctaataataa actagtaata gattagttaa
181 aataaatctt ttgccattta tagcattaaa gaataaagat tggtagtgtt tacttatttt
241 aaataactat aaaagctata ttataaatta atttatagct aactatataa aataaaagtc
301 tagcttttta tactaccttt ttacaccttt tatattactt agctttttaa tatattatac
361 tatttactat taaaagtaca gtattattat tattttattt taaatctact aaatcttaat
421 aatttaaata tatatagtaa gtaaaccctt attttttact atattatagt ataaaaaagg
481 cttttagtaa aaaaaagcgt ataaaaagta ataaagttat agctagtctt tttttattaa
541 gtattattaa attaatttat tacctaataa cttacttttc tatctatact ttctaaatta
601 ctttatataa aatctttaaa gcgcgtacag tttaaagatt acgtttttag cactctacaa
661 ttaagtaaaa aggtatagcg cagtattact tcaattaaag aaaacaccaa cttaaagaac
721 ttaaagaact taacgtagcg ccttctaaca aaagtaaaga atgctattaa caaacaaaac
781 cgtgctatta ccttttagaa taagcgaatt aagaagctaa aagcgctatt agcattataa
841 aaggttagca agcaaagaaa ggtaaaccta gtacttaata agcgttttat acgtattctc
901 aacgttatta aggagcgcca gcgcctagaa aggacgctac aaccagaaaa cacggctaga
961 gaggtagccg cggcgccgct gaacagattc atacatgttt ttaactatat aactggtgag
1021 gaggtatagg aggagtaatc taaatatgtg cagagcttgt attttcgtgc aaaacaatgg
1081 cccaaatggg ggggtggccc agaagggggg gtgggtccac ttagtcaact caaacaatgg
1141 tacattcaaa ctttcagagc cccgttttag ttaataattt actctgaggc ctttattaag
1201 tgatacatgg tacattagtg gatatttttt agaaagacaa gtcgtagcgg cgagtggagg
1261 cgtagcgagt aaacttcgct ccagacgcaa tctcgtcaat ccgaatcacc tcctggcatg
1321 acttcagatt gcatgcggct ccatatgccc tcgattaaat cgctgttgga gaataatcaa
1381 atcaaagtca gcgtatatct gaaaaaaaga aagccacaag cgagaatcgg gggtataccc
1441 ttgtgtccgg atcagctcga cccctttctt ccgcataaat gcaagaaaac gtcgttttgt
1501 ccgatcgcgc ttgaattgcg caagtacttt gtcacgccac tctatacttt ccacctgccg
1561 agtgttgata acaattttct ggctctcgcg agagtaggca atgctggtaa gttcacggag
1621 gcgcaggtgg aagtcaatag gctccttaaa tataccccag ctggtagaag gttccatctc
1681 cttaagtacc tggtgttcaa acatgggctc acagtcgtgg cacttgtcca cccaatgcca
1741 atactgtgtt gtacttgggt tagaagtaag gcgcattgtt ttaacttggt gcacacgcca
1801 gtctttcttt accacagggt ctcttgtcag tgagtcagtt gacgtgtacc ccgaacattc
1861 aagatcctcc tcatgcgcca gtgatccagt agcatcaata gtcgtatagc cagaggtggc
1921 taaggcaaga tcttgcaagc ttcctgatgt cagccttccg tgagtttgtg gataccgaaa
1981 tttacccgac tgctggtcgg aaacttctaa agatgacgac gatgagatag agcgtcgctg
2041 cttctgctga gcttgactgt gacgccgctg cctcgcatgc ttttttgagc tccggcttaa
2101 ctggtcgcct gattcaacat gcgcacgctt ggtaggggtc gatgctacag ccggcacatc
2161 tttacgtttc ccccccgccg actttctggt ggttgaagga cggccaatat ttccaaaccc
2221 gttttttgac cgaagatcag ccaacttggg atcgtggtac attttcgcca ctattcggtc
2281 cagcttgaat tcctttggcc gggcggtata caattcatgc aaccgctgac gaagccactg
2341 tagtggtgtc acgtccatct tgaatttcgc caattcatct agtgtggcaa ccatacgaaa
2401 tagagtatcg tagtgaacga gggaaggggt cacccactgc tttccaatga tttggaaggg
2461 gtgaaaatca cccttttgaa ggaatttcag agaacttctg ccacgattca cttgccggcc
2521 agcctggaat acagatgtgc ggtctttttc tgtttgtagg tgctcaggca tatttttcag
2581 agcagcaagc ttttccaccc actcgtcgag tttgctgcga atcggcactt caacccgctt
2641 ccagtccggc tcccaatatg catgctctgg cgttattttg cgtataggaa cgccgcgcat
2701 gatttcaggc tcgagaaata tcataccgtc atctttcagc acaagactgt ctttcgtgat
2761 ttcttttagc tcgaggatcg caggagttaa attttctttt ccgggaaatg tcgtctgggg
2821 gggtgtgata gataacttgt cattggcatg ggagtgctga acgtgttctt cgccatcagt
2881 gttggcactg gcattagtct ctgctggtaa cttcttgtct cccgagtttt tggccaagtc
2941 aggtgccaca tcgattgatt gtttgctttg ctgttgctgt tggcccgaga actggtcgtc
3001 aatgacagac tgcctgggcc gctttccaga tcctgaagac tgggcggctg ctccatgaca
3061 gccttgcttg ttccactcgc agtttccgca ccgaggaaag tcgctgccac ccacgataat
3121 gcagagagaa tataggccct ggcctttggt acacgtatgg cacgcccgtc cttgtatctc
3181 gccagtcgcc tgtatcatga aactcaacca tttcgatttt ttgggctcac tgctttcgtg
3241 tatatcgtcc aggctatctt gtgtgagctt ccggcccatt cggatctcaa cgcttcgtcg
3301 aatcggaagc tctctaagct tttgaaccca atggttgccc gcaatgagac gctttaaagt
3361 gccgacaacg atgccgtctg gaccgactac ttcaactcca gcaattttac tggacaagct
3421 ttgaactgac acgcggttca caaagttcgc gtctctcagg ccccgtttat ttgcatcggc
3481 ttctgaggag tcctctggcg aagatatctt aaattgcagc tcttcatctc gagtagttgt
3541 tgcttcggat aggatactgt cttccaaatc cgcatttttg tttttaggag cacgttcgga
3601 atgaacaccg ttgctgtctt gttctgcagt gccatggtgt gggtttccag ctttctcgca
3661 actggcagct cgagcgttgg caatccacgc tttgactctc atgtcatctg ctgtgcgctt
3721 ctctgcaaca gattgttttc gcttctcaaa ctggtcgtca agccagtcca aatctgcatg
3781 tttttcgtca acaagcacac gggcttgcag gagtgcttca gtaaggcgag tatgctggga
3841 aatagcttcg acgagttctg cacggagagc cgtagcttcc tcgccgtatt ctctgtgcat
3901 atccttatct tctttgactc gagaaagcgt gatctgcttc agccaattgg tttcaaccgc
3961 gtcccaactg aatagttcgt caagctccca gctggaccgc aaacgacgat ttctatctgt
4021 ctcttcatca tgcatcttga cagacgttat tcatttgaag gctgagcata taatgacgaa
4081 caaattggaa taaaagaatg gtgtggctgg aagatgcgat taatcttctg tcatcaagcg
4141 gagtatgaag tccacatatg tctcttgctt cgcatatata caatctgcgc acaatgcgag
4201 atgcaaatac gctctcgcga aagagggaag cggatgagtc ttgacctgct aggcgacttg
4261 tggagacaaa gggttacccg tagcgaccga gggttttgag gacagcgagc aatgagaaga
4321 cagggagaat aggagccaag cctcaagtgc agatgcgagt taacagcaag aggtgtcgaa
4381 ttataataga ggcaagtgcg cagaagaggt ggcaaggctg tctgggcata tattgttggt
4441 aatatgtaag gtacgggatt ttcaaagata aatataataa ttacagagta cggagtacgg
4501 aggtcccttc caaaagaaag ggctcaccac ttttccatag tggtagcaat atacagtgat
4561 tttattatat atacggagaa aaccattagc gacagctcgc taaagcttag tagactagct
4621 cactaatttg ttccgcttat taatatagct acagggctcc cagcacataa gactgcgcta
4681 ataaattggt ggtaaataca gtgttaataa attaaacgta ctatacccac ctacttaatt
4741 tgccaaaagc ggtgagccct ttcttttggg agggacctcc gtacgagaca gataaatgga
4801 ttttgcgcga ctagaaggga tgaacgtcgt tacaatataa cccactaata ttgaaatgaa
4861 tgttattggg caactgtcat gtgactggct cactttcgat agcacgcagc tcgttcaaaa
4921 ggctgtgccc aaagttcaag ctgattttat ttaataagag agttgctatt tgtactccgt
4981 acagtaaatt cttgttatct atacagtaaa cccactgatg acagataaag tacatcgggt
5041 agggcccatt ccttaccgcc aaaggcctac aattaaatat aataattaac caataatatt
5101 acacggtcgt tgcctagcca acttgcgaaa ataaaatgat aactatagcc ccccctcttt
5161 tatttctata aaataaaagg aaattagcaa attatagaat agggtgttgc ctagttaact
5221 acacataaaa atatgatttc ttttctttac ccccccttat tgccgttatt actatttaaa
5281 cctataaaca aaaatgtagc taattataat acaagcccct ctttctaatt ttagcgcctt
5341 tttaaggtta aaacctatac cttcctcctt cttacgctat atttgcctct tatactgcct
5401 tttatactat ctttcatact accttttata ctatcttttc cgctacctta tacgctacct
5461 tttatactac cttatttgct acttatatta tagattcctt tttacgtata atagcctttg
5521 ctttgtctat tactgctaag cttagtcctt gtttaaatga taataattta tagtaaagag
5581 acgtaagagc tagttatacg cttttatttt agcctaagga ggatagttaa gcaagttgtt
5641 attacgtgtt gggttaaaac aaagggaaaa cgcttacttt attttaacta aaaggtcttt
5701 aaagggatag tttgccttaa ttatttataa taggatttaa cttttaaata taaagaaggc
5761 agttattatt tgcctacatt ataggtagta taagtaacta aagtaaacca ttataattaa
5821 gtatactaga tttatattta actactagta aggattaata ttagctatta aaactatagt
5881 ttgttttata aaaacatttg gcattataag agtataatat gtctgattat tattataagt
5941 acttatatat agttaaagta aaggcaagaa atcagcctta gactttatag taatgaggct
6001 aagagtaagt tagtattact aaataaggta gtttatataa cttattaata ctttgcaaaa
6061 gtgctactta agatataaaa catttatata attatgctat attttctttt tttgctaagt
6121 aactataatc ttaattgtat acttttctat aagtatatac tttttataag taaacgtttt
6181 tactatatta agcatagtta aaagctaaat tctatattat tatctagcct tttcaatata
6241 gctaattaaa ctagttatta atatttatta cattattatc taatttatat ataaatttac
6301 agttaagctt aactatatca gctaaacgta agcactaact aactagttaa gctctttaaa
6361 acttttttta ttaattagta taaagaaaca aaggtagtat acaccaatcg atgctgtgtt
6421 atctggctcc ggccgggagt ttagctcgga cctcgctaaa aaggataaaa gaaataacaa
6481 acaagctagt tagcctactt tatagcatgg ccttcacaac aacccctact aaaggaccgg
6541 ccgttagctt ctaacgaggg gggtagaacg cagaatgcga ctctactacc cgcaacctgc
6601 gggcagtgga aaggacgcaa agggcctaat aagtaagtaa ggatgcagcc gccgctataa
6661 ggatagcacg caaagactaa gcataggcgc tctaggacat aagcacggct tattagcaag
6721 gtatagtcta tgccgcgtta gaagtcgaga ccttagccta gcgccttaag cggtaagcaa
6781 gactacgtag ctataggcct ataaaggctg cgcacctctc cttgctacgc aaagtagaca
6841 ggacgataat aagtttctat aataaaaaga cggaagaact atcggcctgc tttttcttaa
6901 ccttattagc aaaacctctt aacctagact agtaggccgg gcctagaatc tttatatctt
6961 aaataattac taaggaaaag atacctagag ctattaaagg taccttctta tataaggtag
7021 taagttttaa taaagtcttt aacgctcttc tttaagcata cctttaatag gttacgctat
7081 agctagccta gattactata gagtttatat aactaagcta ttagcttata gcatttaaaa
7141 agactttaaa gatataaatg tttactttgt ctataaaaat aaagcttata gaagatttat
7201 aataatgtag ctaaatataa aatagaagaa gcgcttaaga aaagagtttg ataaaagact
7261 actattaaaa tagttattta tattcttata taaaaaagaa tagtaagact tcaatataaa
7321 gattactaaa actaaaacta aagtctttag aaaacaatgc tatataaagc gtactttata
7381 attattaaaa ctaattataa ctaatacaat tataaggaat ataataagta aaaggtaaga
7441 tcttaatatt ataaaaagta taatagttag aattattacc tttttatact ttataaaagg
7501 gtttatacaa ctataatagt acgtttaaga tttaaaaagg ggtttaatca agtaaggcta
7561 taatactaat aaaggctaag cattaaaaat tattatttta taatgtacct tataagttaa
7621 aataagacta aaaaccttta atttaaaaga aacaaaggct ttaatactaa aaggtttata
7681 aaagtaaaag gctaaagagt aataataata aaatactata aagaagaata ataaaaatat
7741 catctaagct ttatttaaat aattctagtt aaactaaaaa gaaaaatata taaaaagtta
7801 taaactttta ctctttttta ttaaaaatat accactagca ctaagttttc tttttactta
7861 ttcttttttt ataaaaaata ctaaagtata tataaaataa gtaaagttta ttaatttata
7921 attatataaa tattaac
//