LOCUS ACGJ01000349 326 bp DNA linear INV 13-JUL-2009
DEFINITION Giardia intestinalis ATCC 50581 strain GS/M clone H7 contig352,
whole genome shotgun sequence.
ACCESSION ACGJ01000349 ACGJ01000000
VERSION ACGJ01000349.1
DBLINK BioProject: PRJNA33815
BioSample: SAMN02953749
KEYWORDS WGS.
SOURCE Giardia intestinalis ATCC 50581
ORGANISM Giardia intestinalis ATCC 50581
Eukaryota; Metamonada; Diplomonadida; Hexamitidae; Giardiinae;
Giardia.
REFERENCE 1 (bases 1 to 326)
AUTHORS Franzen,O., Jerlstrom-Hultqvist,J., Castro,E., Sherwood,E.,
Ankarklev,J., Reiner,D.S., Palm,D., Andersson,J.O., Andersson,B.
and Svard,S.G.
TITLE Draft genome sequencing of giardia intestinalis assemblage B
isolate GS: is human giardiasis caused by two different species?
JOURNAL PLoS Pathog. 5 (8), E1000560 (2009)
PUBMED 19696920
REFERENCE 2 (bases 1 to 326)
AUTHORS Franzen,O., Jerlstrom-Hultqvist,J., Sherwood,E., Castro,E.,
Ankarklev,J., Reiner,D., Palm,D., Andersson,J.O., Andersson,B. and
Svard,S.G.
TITLE Direct Submission
JOURNAL Submitted (15-APR-2009) Department of Cell and Molecular Biology,
Karolinska Institutet, Berzelius vag 35, Stockholm S-171 77, Sweden
COMMENT This is a MIRA assembly
(http://www.chevreux.org/projects_mira.html) comprised of 454 data
generated by GS 20 FLX.
Genome coverage: 16x
Sequencing Technology: 454.
The VEuPathDB Bioinformatics Resource Center (www.veupathdb.org)
may also have contributed to the annotation of this genome.
Annotation and related data can be viewed and updated at
http://veupathdb.org and inquiries can be sent to
help@veupathdb.org.
##Genome-Assembly-Data-START##
Assembly Method :: MIRA v. 2008
Genome Coverage :: 16x
Sequencing Technology :: 454 GS 20 FLX
##Genome-Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..326
/organism="Giardia intestinalis ATCC 50581"
/mol_type="genomic DNA"
/submitter_seqid="contig352"
/strain="GS/M clone H7"
/culture_collection="ATCC:50581"
/db_xref="taxon:598745"
/note="assemblage B"
ORIGIN
1 ctgaaatcgt ttctatactc agtggataac atactcattt cctcatgtgc cayycctcag
61 agggttccca ataatcgatc tactccttcg tctagtgcac ggacagacac tgtaactcat
121 cgcctgcggg gtcccttctg aagggtgggt cttgtatgca ctgacctcag tgtcctcata
181 aaactacagc cacttggtga gggttcttac agtgactacg cctctcagca tggctggcga
241 ttcggtgcat ccacaagggt tcaacggcac agcactgaag caaccagtgg atagagtgtt
301 gttggccact caattacgat ccacag
//