LOCUS ABQO020000178 2745 bp DNA linear MAM 17-FEB-2012
DEFINITION Notamacropus eugenii contig3540, whole genome shotgun sequence.
ACCESSION ABQO020000178 ABQO020000000
VERSION ABQO020000178.1
DBLINK BioProject: PRJNA12587
BioSample: SAMN03004383
KEYWORDS WGS.
SOURCE Notamacropus eugenii (tammar wallaby)
ORGANISM Notamacropus eugenii
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Metatheria; Diprotodontia; Macropodidae; Notamacropus.
REFERENCE 1 (bases 1 to 2745)
AUTHORS Renfree,M.B., Papenfuss,A.T., Deakin,J.E., Lindsay,J., Heider,T.,
Belov,K., Rens,W., Waters,P.D., Pharo,E.A., Shaw,G., Wong,E.S.,
Lefevre,C.M., Nicholas,K.R., Kuroki,Y., Wakefield,M.J.,
Zenger,K.R., Wang,C., Ferguson-Smith,M., Nicholas,F.W.,
Hickford,D., Yu,H., Short,K.R., Siddle,H.V., Frankenberg,S.R.,
Chew,K.Y., Menzies,B.R., Stringer,J.M., Suzuki,S., Hore,T.A.,
Delbridge,M.L., Mohammadi,A., Schneider,N.Y., Hu,Y., O'Hara,W., Al
Nadaf,S., Wu,C., Feng,Z.P., Cocks,B.G., Wang,J., Flicek,P.,
Searle,S.M., Fairley,S., Beal,K., Herrero,J., Carone,D.M.,
Suzuki,Y., Sugano,S., Toyoda,A., Sakaki,Y., Kondo,S., Nishida,Y.,
Tatsumoto,S., Mandiou,I., Hsu,A., McColl,K.A., Lansdell,B.,
Weinstock,G., Kuczek,E., McGrath,A., Wilson,P., Men,A.,
Hazar-Rethinam,M., Hall,A., Davis,J., Wood,D., Williams,S.,
Sundaravadanam,Y., Muzny,D.M., Jhangiani,S.N., Lewis,L.R.,
Morgan,M.B., Okwuonu,G.O., Ruiz,S.J., Santibanez,J., Nazareth,L.,
Cree,A., Fowler,G., Kovar,C.L., Dinh,H.H., Joshi,V., Jing,C.,
Lara,F., Thornton,R., Chen,L., Deng,J., Liu,Y., Shen,J.Y.,
Song,X.Z., Edson,J., Troon,C., Thomas,D., Stephens,A., Yapa,L.,
Levchenko,T., Gibbs,R.A., Cooper,D.W., Speed,T.P., Fujiyama,A.,
Graves,J.A., O'Neill,R.J., Pask,A.J., Forrest,S.M. and Worley,K.C.
TITLE Genome sequence of an Australian kangaroo, Macropus eugenii,
provides insight into the evolution of mammalian reproduction and
development
JOURNAL Genome Biol. 12 (8), R81 (2011)
PUBMED 21854559
REMARK Publication Status: Online-Only
REFERENCE 2 (bases 1 to 2745)
CONSRTM Tammar Wallaby Genome Sequencing Consortium
TITLE Direct Submission
JOURNAL Submitted (20-AUG-2008) Human Genome Sequencing Center, Baylor
College of Medicine, One Baylor Plaza, Houston, TX 77030, USA
REFERENCE 3 (bases 1 to 2745)
AUTHORS Lindsay,J., Mandoiu,I., O'Neill,R., Pask,A. and Heider,T.
CONSRTM Tammar Wallaby Genome Sequencing Consortium
TITLE Direct Submission
JOURNAL Submitted (31-MAR-2011) MCB, University of Connecticut, 354
Mansfield Road, Unit 2131, Storrs, CT 06269, USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: Phrap v. 20.0
Assembly Name :: Meug_2.0
Genome Coverage :: 2x ABI Sanger; 6x Illumina
Sequencing Technology :: ABI Sanger; Illumina
##Genome-Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..2745
/organism="Notamacropus eugenii"
/mol_type="genomic DNA"
/submitter_seqid="contig3540"
/db_xref="taxon:9315"
/sex="female"
/tissue_type="lung"
ORIGIN
1 cacaaaaaag aattccccaa agtgtccatt tgatcatgtt accactatcc tctactctat
61 atatgccagt ggctcttttt tacctccagc atcaaataaa attttattta ttttttttgg
121 cattcaaagc ccttcataat ctagcacagg gattcttaag ctttttcctc ttgcgattct
181 tttagtgctt cttaaatggt tgaccaaccc catatgggtt taggaagcac tgattagccc
241 cctcttatcc atttatatct tacttatact tatatcagtc atcttatacc ttacttccca
301 acaagtactc ttctatccat tgtcactgac ctcttggatg ctttatgcac aagacactcc
361 atctctgggc tgtgaacatt ttctctagct gtcccccatg cctggaatac tctccctctt
421 ggactccaac tattgacctc tctggcttct ttacattcta actaaaattg catcttttac
481 tgtaaacctt cctcatctcc tcttaatttt aatgccttcc tttccatttg tcctgtatac
541 aacttgtttt agatatattt gtctgtatat tgcctctcaa ttgtatattc cctaagcaga
601 gacagtcttt tacctctctt ttcttttatc ttcagcactt agcacagtgt ctgacatata
661 gtaggtacct aacaaatgtt taataattga ctgaataaag tgaccacttc aggaaaattc
721 atttttcata ctactcggga cctagcaaac aaatcagtag taagggaatg catgagtagt
781 tcttattgtt aaaatggctg cttaagtttc agtacctaga aacagagttg gtacacacaa
841 agggtaaaaa aaaatcacaa tatagataaa tttgagaaaa aagcataaaa tttagaaaac
901 aaaaaaagtt aaaaatacca ataaaagaga attaagctga aagatatcac accaaggtta
961 cttagtgtca catgatcatt cttgctcttt tcatttcttt tttcattttg caccatgcca
1021 accttcttgc tagatgttca ttggtttcct tagtccaagt tctgccattt cttttatact
1081 ggtcctatga agtgttcctc taactttaaa attctgtttt tccatatttt aaatccctac
1141 aataaccaaa atcaattata taaatgtttt gtcatggctg atccatttgt gatcattttt
1201 tcacattata gtacattttc tataagttaa aggacctttt atttctttct ttttatttgt
1261 ttttgtttac tttatcctag aacataattg gccatggagg tgagattagg tcattgtcta
1321 tttaaaataa tcaatacaga gtttagctca accaacataa cataaaataa atgagtcttt
1381 aaaatttata atacaggtga agacgtacat ggttcatttg gatttggaag ctgaggaaca
1441 cttcagtaat atcctattta agtctatgtt ataatttaag agagccttgc tttattaaga
1501 ctgagaatgg caattaagat ttgggaatta ggtagtgaaa gaagcagaaa gaaaagaaac
1561 tgaattgcaa aatgaaaaaa gatgaggaag aggaggagaa ggagaaggag aagaaggaga
1621 aggaggagga ggagaaggag aaggaggaag aagagaggag gaagaattag agaaggaaga
1681 gaaggagata gttccatcaa aaatatcaga aagaatacag gaagagaaga aactacacaa
1741 gggaaaaaaa tgaaaaaaaa agtatggaag ttcagaaagg attgttatac aagaagaaaa
1801 gatttattaa cctaatacta tgtagtatta tttttacaat ttatttttgg ggaaattttt
1861 ttcattttac atttattaag tgttaaaaat gcattagaag ttaaacaaaa atctgtgggc
1921 tgctaaaaaa tgacagcagg gcagcaccaa ttaaagatat ccttgaagag aatgccatat
1981 gctgctttga gggaaattcc taagtttagg ttacaggatt taacaaataa aaaaccctag
2041 catgtatgag ggatggggaa cctgcgggtt tgaagataca tgtggtcctc taggtcctca
2101 ggtttgaccc tgtgaagttt gggttctatc aaaggactac acttgaggac ctagaaggcc
2161 atatgtggac tctaggccac aggttcacca cccctggaat caacattgtc attttctccc
2221 ttattttttt tagagacaca gatataatga atacctattt tacattaaaa agcaaatcaa
2281 gaaatagttc caatagaaac aaaattctgt gtgtgtgtgt gtgtgtgatt atataataga
2341 aactgcaatc tttctttccc taagctttta gtcagttgtg gatcttcttc cttccttccc
2401 gtagatgttt ccaaaggaaa ttccaagaaa tctgaataac cccaatctag tagactgaga
2461 gaaaatcagg gagacatctg gagactctcc agaatcccta gacctgtggg aagggcaaat
2521 ccttcaggag acatatcatt tgggttctaa ggacaagaga acttcaacag tcttatgctc
2581 ctttgagtca gaaattaatt taagagaggc ttgcttttaa gtttcaaggg gagggatgtt
2641 tctctaaatt cctgaaggat accttgtgtg aggcgtagag ttatagacat tatataaagg
2701 aagccttcag gaatgaaaac agcaacatct gcaattttga gctat
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