GACK00000000.1 Rhipicephalus pulchellus

Master

# of Contigs: 11,227 # of Proteins: 11,227 Total length: 16,933,801 bp BioProject: PRJNA170743 Sequence Read Archive: SRR521835, SRR521944, SRR521951, SRR521953 Keywords: TSA Annotation: Contigs Organism: Rhipicephalus pulchellus – show lineagehide lineage Eukaryota, Metazoa, Ecdysozoa, Arthropoda, Chelicerata, Arachnida, Acari, Parasitiformes, Ixodida, Ixodoidea, Ixodidae, Rhipicephalinae, Rhipicephalus, Rhipicephalus Biosource: /dev_stage = adult /mol_type = mRNA /tissue_type = salivary gland TSA: GACK01000001:GACK01011227 Reference: Sexual differences in the sialomes of the zebra tick, Rhipicephalus pulchellus : J Proteomics 117, 120-144 (2015) – Tan,A.W., Francischetti,I.M., Slovak,M., Kini,R.M., Ribeiro,J.M. Submission: Submitted (16-NOV-2012) Laboratory of Malaria and Vector Research, National Institute of Allergy and Infectious Diseases, 12735 Twinbrook Parkway room 2E32D, Rockville, MD 20852, USA – Tan,A.A.W.L., Francischetti,I.M.B., Manjunatha,K.K.R., Ribeiro,J.M.C.

The Rhipicephalus pulchellus transcriptome shotgun assembly (TSA) project has the project accession GACK00000000. This version of the project (01) has the accession number GACK01000000, and consists of sequences GACK01000001-GACK01011227. Abyss was run with every even k value parameter from 24 to 96 and minimum coverage of 10. Trinity was run with minimum coverage of 10. Combined assemblies were clustered by a parallelized pipeline of blasts feeding cap3 assemblers with a decreasing word size (-W) from 300 to 56. ##Assembly-Data-START## Assembly Method : abyss v. 1.3.4; trinity v. 2012-06-08; cap3 v. 1999 Sequencing Technology : Illumina ##Assembly-Data-END##

Contigs

Proteins

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Contigs: GenBank:GACK01.1.gbff.gz 11.7 Mb FASTA:GACK01.1.fsa_nt.gz 4.9 Mb ASN.1:GACK01.1.bbs.gz 8.9 Mb

Proteins: GenPept:GACK01P.1.gnp.gz 4.5 Mb FASTA:GACK01P.1.fsa_aa.gz 3.2 Mb ASN.1:GACK01P.1.bbs.gz 3.6 Mb

History

Minor Version	Create Date
1	12/04/2012
8	11/12/2017