AAFR00000000.3 Monodelphis domestica

Master

# of Contigs: 72,811 # of Proteins: 0 # of Scaffolds/Chrs: 1,127 Total length: 3,501,643,220 bp BioProject: PRJNA12561 BioSample: SAMN02953611 Keywords: WGS Organism: Monodelphis domestica – show lineagehide lineage Eukaryota, Metazoa, Chordata, Craniata, Vertebrata, Euteleostomi, Mammalia, Metatheria, Didelphimorphia, Didelphidae, Monodelphis Biosource: /mol_type = genomic genomic /pop_variant = pop1 WGS: AAFR03000001:AAFR03072811 Scaffolds: CM000368:CM000376, DS029321:DS030438 1,127 scaffolds, total length is 3,569,352,935 bases Reference: Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences : Nature 447 (7141), 167-177 (2007) – show 64 authorshide authors Mikkelsen,T.S., Wakefield,M.J., Aken,B., Amemiya,C.T., Chang,J.L., Duke,S., Garber,M., Gentles,A.J., Goodstadt,L., Heger,A., Jurka,J., Kamal,M., Mauceli,E., Searle,S.M., Sharpe,T., Baker,M.L., Batzer,M.A., Benos,P.V., Belov,K., Clamp,M., Cook,A., Cuff,J., Das,R., Davidow,L., Deakin,J.E., Fazzari,M.J., Glass,J.L., Grabherr,M., Greally,J.M., Gu,W., Hore,T.A., Huttley,G.A., Kleber,M., Jirtle,R.L., Koina,E., Lee,J.T., Mahony,S., Marra,M.A., Miller,R.D., Nicholls,R.D., Oda,M., Papenfuss,A.T., Parra,Z.E., Pollock,D.D., Ray,D.A., Schein,J.E., Speed,T.P., Thompson,K., VandeBerg,J.L., Wade,C.M., Walker,J.A., Waters,P.D., Webber,C., Weidman,J.R., Xie,X., Zody,M.C., Broad Institute Genome Sequencing Platform, Broad Institute Whole Genome Assembly Team, Graves,J.A., Ponting,C.P., Breen,M., Samollow,P.B., Lander,E.S., Lindblad-Toh,K. Submission: Submitted (03-NOV-2004) Broad Institute of MIT and Harvard, 320 Charles Street, Cambridge, MA 02142, USA – show 6 authorshide authors Lindblad-Toh,K., Chang,J.L., Clamp,M., Zody,M.C., Lander,E.S., The Genome Sequencing Platform, The Genome Assembly Team Submission: Submitted (03-JAN-2006) Broad Institute of MIT and Harvard, 320 Charles Street, Cambridge, MA 02141, USA – show 6 authorshide authors Lindblad-Toh,K., Jaffe,D.B., Chang,J.L., Clamp,M., Lander,E.S., The Genome Sequencing Platform, The Genome Assembly Team

On Jan 12, 2006 this sequence version replaced gi:63244537. The Monodelphis domestica whole genome shotgun (WGS) project has the project accession AAFR00000000. This version of the project (03) has the accession number AAFR03000000, and consists of sequences AAFR03000001-AAFR03072811.

Contigs

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GenBank:AAFR03.1.gbff.gz 80.5 Mb
 AAFR03.10.gbff.gz 80.8 Mb
 AAFR03.11.gbff.gz 80.7 Mb
 AAFR03.12.gbff.gz 80.8 Mb
 AAFR03.13.gbff.gz 80.8 Mb
 AAFR03.14.gbff.gz 80.9 Mb
 AAFR03.15.gbff.gz 80.9 Mb
 AAFR03.16.gbff.gz 81 Mb
 AAFR03.17.gbff.gz 81 Mb
 AAFR03.18.gbff.gz 74.1 Mb
 AAFR03.2.gbff.gz 80.7 Mb
 AAFR03.3.gbff.gz 80.6 Mb
 AAFR03.4.gbff.gz 80.5 Mb
 AAFR03.5.gbff.gz 80.8 Mb
 AAFR03.6.gbff.gz 80.6 Mb
 AAFR03.7.gbff.gz 80.7 Mb
 AAFR03.8.gbff.gz 80.8 Mb
 AAFR03.9.gbff.gz 80.8 Mb

FASTA:AAFR03.1.fsa_nt.gz 56.6 Mb
 AAFR03.10.fsa_nt.gz 56.4 Mb
 AAFR03.11.fsa_nt.gz 56.5 Mb
 AAFR03.12.fsa_nt.gz 56.6 Mb
 AAFR03.13.fsa_nt.gz 56.4 Mb
 AAFR03.14.fsa_nt.gz 56.3 Mb
 AAFR03.15.fsa_nt.gz 56.4 Mb
 AAFR03.16.fsa_nt.gz 56.1 Mb
 AAFR03.17.fsa_nt.gz 55.9 Mb
 AAFR03.18.fsa_nt.gz 49.2 Mb
 AAFR03.2.fsa_nt.gz 56.6 Mb
 AAFR03.3.fsa_nt.gz 56.6 Mb
 AAFR03.4.fsa_nt.gz 56.5 Mb
 AAFR03.5.fsa_nt.gz 56.5 Mb
 AAFR03.6.fsa_nt.gz 56.5 Mb
 AAFR03.7.fsa_nt.gz 56.5 Mb
 AAFR03.8.fsa_nt.gz 56.5 Mb
 AAFR03.9.fsa_nt.gz 56.6 Mb

ASN.1:AAFR03.1.bbs.gz 54.1 Mb
 AAFR03.10.bbs.gz 55.6 Mb
 AAFR03.11.bbs.gz 54.7 Mb
 AAFR03.12.bbs.gz 54.7 Mb
 AAFR03.13.bbs.gz 55.6 Mb
 AAFR03.14.bbs.gz 56.2 Mb
 AAFR03.15.bbs.gz 55.9 Mb
 AAFR03.16.bbs.gz 57.9 Mb
 AAFR03.17.bbs.gz 58.6 Mb
 AAFR03.18.bbs.gz 63.2 Mb
 AAFR03.2.bbs.gz 55.6 Mb
 AAFR03.3.bbs.gz 54.2 Mb
 AAFR03.4.bbs.gz 55.5 Mb
 AAFR03.5.bbs.gz 55.4 Mb
 AAFR03.6.bbs.gz 54.5 Mb
 AAFR03.7.bbs.gz 55.5 Mb
 AAFR03.8.bbs.gz 55 Mb
 AAFR03.9.bbs.gz 54.8 Mb