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AACP00000000.1 Ustilago maydis 521

This project is replaced

Master
# of Contigs: 278 (278 are dead)
# of Proteins: 6,522 (6522 are dead)
Total length: 19,801,540 bp
BioProject: PRJNA1446
BioSample: SAMN02900459
Keywords: WGS
Annotation: Contigs
Organism: Ustilago maydis 521 – show lineagehide lineage
Eukaryota, Fungi, Dikarya, Basidiomycota, Ustilaginomycotina, Ustilaginomycetes, Ustilaginales, Ustilaginaceae, Ustilago, Ustilago maydis
Biosource:
/mol_type = genomic genomic
/strain = 521
WGS: AACP01000001:AACP01000278
Reference:
Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis : Nature 444 (7115), 97-101 (2006) – show 80 authorshide authors
Kamper,J., Kahmann,R., Bolker,M., Ma,L.J., Brefort,T., Saville,B.J., Banuett,F., Kronstad,J.W., Gold,S.E., Muller,O., Perlin,M.H., Wosten,H.A., de Vries,R., Ruiz-Herrera,J., Reynaga-Pena,C.G., Snetselaar,K., McCann,M., Perez-Martin,J., Feldbrugge,M., Basse,C.W., Steinberg,G., Ibeas,J.I., Holloman,W., Guzman,P., Farman,M., Stajich,J.E., Sentandreu,R., Gonzalez-Prieto,J.M., Kennell,J.C., Molina,L., Schirawski,J., Mendoza-Mendoza,A., Greilinger,D., Munch,K., Rossel,N., Scherer,M., Vranes,M., Ladendorf,O., Vincon,V., Fuchs,U., Sandrock,B., Meng,S., Ho,E.C., Cahill,M.J., Boyce,K.J., Klose,J., Klosterman,S.J., Deelstra,H.J., Ortiz-Castellanos,L., Li,W., Sanchez-Alonso,P., Schreier,P.H., Hauser-Hahn,I., Vaupel,M., Koopmann,E., Friedrich,G., Voss,H., Schluter,T., Margolis,J., Platt,D., Swimmer,C., Gnirke,A., Chen,F., Vysotskaia,V., Mannhaupt,G., Guldener,U., Munsterkotter,M., Haase,D., Oesterheld,M., Mewes,H.W., Mauceli,E.W., DeCaprio,D., Wade,C.M., Butler,J., Young,S., Jaffe,D.B., Calvo,S., Nusbaum,C., Galagan,J., Birren,B.W.
Submission:
Submitted (23-JUL-2003) Whitehead Institute/MIT Center for Genome Research, 320 Charles Street, Cambridge, MA 02142, USA – show 213 authorshide authors
Birren,B., Nusbaum,C., Abebe,A., Abouelleil,A., Adekoya,E., Ait-zahra,M., Allen,N., Allen,T., An,P., Anderson,M., Anderson,S., Arachchi,H., Armbruster,J., Bachantsang,P., Baldwin,J., Barry,A., Bayul,T., Blitshsteyn,B., Bloom,T., Blye,J., Boguslavskiy,L., Borowsky,M., Boukhgalter,B., Brunache,A., Butler,J., Calixte,N., Calvo,S., Camarata,J., Campo,K., Chang,J., Cheshatsang,Y., Citroen,M., Collymore,A., Considine,T., Cook,A., Cooke,P., Corum,B., Cuomo,C., David,R., Dawoe,T., Degray,S., Dodge,S., Dooley,K., Dorje,P., Dorjee,K., Dorris,L., Duffey,N., Dupes,A., Elkins,T., Engels,R., Erickson,J., Farina,A., Faro,S., Ferreira,P., Fischer,H., Fitzgerald,M., Foley,K., Gage,D., Galagan,J., Gearin,G., Gnerre,S., Gnirke,A., Goyette,A., Graham,J., Grandbois,E., Gyaltsen,K., Hafez,N., Hagopian,D., Hagos,B., Hall,J., Hatcher,B., Heller,A., Higgins,H., Honan,T., Horn,A., Houde,N., Hughes,L., Hulme,W., Husby,E., Iliev,I., Jaffe,D., Jones,C., Kamal,M., Kamat,A., Kamvysselis,M., Karlsson,E., Kells,C., Kieu,A., Kisner,P., Kodira,C., Kulbokas,E., Labutti,K., Lama,D., Landers,T., Leger,J., Levine,S., Lewis,D., Lewis,T., Lindblad-toh,K., Liu,X., Lokyitsang,T., Lokyitsang,Y., Lucien,O., Lui,A., Ma,L.J., Mabbitt,R., Macdonald,J., Maclean,C., Major,J., Manning,J., Marabella,R., Maru,K., Matthews,C., Mauceli,E., Mccarthy,M., Mcdonough,S., Mcghee,T., Meldrim,J., Meneus,L., Mesirov,J., Mihalev,A., Mihova,T., Mikkelsen,T., Mlenga,V., Moru,K., Mozes,J., Mulrain,L., Munson,G., Naylor,J., Newes,C., Nguyen,C., Nguyen,N., Nguyen,T., Nicol,R., Nielsen,C., Nizzari,M., Norbu,C., Norbu,N., O'donnell,P., Okoawo,O., O'leary,S., Omotosho,B., O'neill,K., Osman,S., Parker,S., Perrin,D., Phunkhang,P., Piqani,B., Purcell,S., Rachupka,T., Ramasamy,U., Rameau,R., Ray,V., Raymond,C., Retta,R., Richardson,S., Rise,C., Rodriguez,J., Rogers,J., Rogov,P., Rutman,M., Schupbach,R., Seaman,C., Settipalli,S., Sharpe,T., Sheridan,J., Sherpa,N., Shi,J., Smirnov,S., Smith,C., Sougnez,C., Spencer,B., Stalker,J., Stange-thomann,N., Stavropoulos,S., Stetson,K., Stone,C., Stone,S., Stubbs,M., Talamas,J., Tchuinga,P., Tenzing,P., Tesfaye,S., Theodore,J., Thoulutsang,Y., Topham,K., Towey,S., Tsamla,T., Tsomo,N., Vallee,D., Vassiliev,H., Venkataraman,V., Vinson,J., Vo,A., Wade,C., Wang,S., Wangchuk,T., Wangdi,T., Whittaker,C., Wilkinson,J., Wu,Y., Wyman,D., Yadav,S., Yang,S., Yang,X., Yeager,S., Yee,E., Young,G., Zainoun,J., Zembeck,L., Zimmer,A., Zody,M., Lander,E.
Submission:
Submitted (14-FEB-2007) Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, MA 02142, USA – show 226 authorshide authors
Birren,B., Nusbaum,C., Abebe,A., Abouelleil,A., Adekoya,E., Ait-zahra,M., Allen,N., Allen,T., An,P., Anderson,M., Anderson,S., Arachchi,H., Armbruster,J., Bachantsang,P., Baldwin,J., Barry,A., Bayul,T., Blitshsteyn,B., Bloom,T., Blye,J., Boguslavskiy,L., Borowsky,M., Boukhgalter,B., Brunache,A., Butler,J., Calixte,N., Calvo,S., Camarata,J., Campo,K., Chang,J., Cheshatsang,Y., Citroen,M., Collymore,A., Considine,T., Cook,A., Cooke,P., Corum,B., Cuomo,C., David,R., Dawoe,T., Degray,S., Dodge,S., Dooley,K., Dorje,P., Dorjee,K., Dorris,L., Duffey,N., Dupes,A., Elkins,T., Engels,R., Erickson,J., Farina,A., Faro,S., Ferreira,P., Fischer,H., Fitzgerald,M., Foley,K., Gage,D., Galagan,J., Gearin,G., Gnerre,S., Gnirke,A., Goyette,A., Graham,J., Grandbois,E., Gyaltsen,K., Hafez,N., Hagopian,D., Hagos,B., Hall,J., Hatcher,B., Heller,A., Higgins,H., Honan,T., Horn,A., Houde,N., Hughes,L., Hulme,W., Husby,E., Iliev,I., Jaffe,D., Jones,C., Kamal,M., Kamat,A., Kamvysselis,M., Karlsson,E., Kells,C., Kieu,A., Kisner,P., Kodira,C., Kulbokas,E., Labutti,K., Lama,D., Landers,T., Leger,J., Levine,S., Lewis,D., Lewis,T., Lindblad-toh,K., Liu,X., Lokyitsang,T., Lokyitsang,Y., Lucien,O., Lui,A., Ma,L.J., Mabbitt,R., Macdonald,J., Maclean,C., Major,J., Manning,J., Marabella,R., Maru,K., Matthews,C., Mauceli,E., Mccarthy,M., Mcdonough,S., Mcghee,T., Meldrim,J., Meneus,L., Mesirov,J., Mihalev,A., Mihova,T., Mikkelsen,T., Mlenga,V., Moru,K., Mozes,J., Mulrain,L., Munson,G., Naylor,J., Newes,C., Nguyen,C., Nguyen,N., Nguyen,T., Nicol,R., Nielsen,C., Nizzari,M., Norbu,C., Norbu,N., O'donnell,P., Okoawo,O., O'leary,S., Omotosho,B., O'neill,K., Osman,S., Parker,S., Perrin,D., Phunkhang,P., Piqani,B., Purcell,S., Rachupka,T., Ramasamy,U., Rameau,R., Ray,V., Raymond,C., Retta,R., Richardson,S., Rise,C., Rodriguez,J., Rogers,J., Rogov,P., Rutman,M., Schupbach,R., Seaman,C., Settipalli,S., Sharpe,T., Sheridan,J., Sherpa,N., Shi,J., Smirnov,S., Smith,C., Sougnez,C., Spencer,B., Stalker,J., Stange-thomann,N., Stavropoulos,S., Stetson,K., Stone,C., Stone,S., Stubbs,M., Talamas,J., Tchuinga,P., Tenzing,P., Tesfaye,S., Theodore,J., Thoulutsang,Y., Topham,K., Towey,S., Tsamla,T., Tsomo,N., Vallee,D., Vassiliev,H., Venkataraman,V., Vinson,J., Vo,A., Wade,C., Wang,S., Wangchuk,T., Wangdi,T., Whittaker,C., Wilkinson,J., Wu,Y., Wyman,D., Yadav,S., Yang,S., Yang,X., Yeager,S., Yee,E., Young,G., Zainoun,J., Zembeck,L., Zimmer,A., Zody,M., DeCaprio,D., Crawford,M., Koehrsen,M., Engels,R., Montgomery,P., Pearson,M., Howarth,C., Larson,L., White,J., Kodira,C., Zeng,Q., Yandava,C., Alvarado,L., Lander,E.

[WARNING] On Feb 10, 2015 this project was updated. The new version is gi:755573553.

The Ustilago maydis 521 whole genome shotgun (WGS) project has the project accession AACP00000000. This version of the project (01) has the accession number AACP01000000, and consists of sequences AACP01000001-AACP01000278.
Contigs
Proteins
Download

Contigs:

GenBank:AACP01.1.gbff.gz 11.9 Mb
FASTA:AACP01.1.fsa_nt.gz 5.9 Mb
ASN.1:AACP01.1.bbs.gz 7.9 Mb

Proteins:

GenPept:AACP01P.1.gnp.gz 3.6 Mb
FASTA:AACP01P.1.fsa_aa.gz 2.3 Mb
ASN.1:AACP01P.1.bbs.gz 2.5 Mb